Protein

Protein accession
3ndfF [EnVhog]
Representative
4DAIJ
Source
EnVhog (cluster: phalp2_2282)
Protein name
3ndfF
Lysin probability
96%
PhaLP type
endolysin
Probability: 90% (predicted by ML model)
Protein sequence
VARRRRLLDRLRVLLNDNTNNLNNMSSPTFRLNWPCDVEKYNLTQYFGENLVDFYSRLGLEGHNGTDFSCPNGTPIYATHDGDVTTPPDGKQSDTAGRVVRVVNKELGILTVYFHLKQVLVASPQKVKTGDLIAYSDNTGMYTTGPHLHFGLYLIDEYCNVLNYNNGYHGAVDPIPYLIKPPQENEIIKNKLENQCYLVKNGKRWWLENEKLFELFMGYPVNKSIIKVVDIITFNAIPFGGVISNKR
Physico‐chemical
properties
protein length:247 AA
molecular weight:28161,7 Da
isoelectric point:8,27
hydropathy:-0,38
Representative Protein Details
Accession
4DAIJ
Protein name
4DAIJ
Sequence length
276 AA
Molecular weight
31032,92860 Da
Isoelectric point
5,83034
Sequence
MLPLKFPLRYYEGQTIGGKPAPVGEPLPISVIYNGFCQNGAVYSSIFGIPSHNGVDCSNGFKTKVYAAHEGKVVKVFDASNSHITKGYGAYVLSDVITLPPDFPVHPNEEVRIMSVYWHASEVLVKVGDQVDRETPVILEGNTGKILGRENWTEEDIKNGRGSHLHFGIKLLKPDGITVLDENNGYGGYINPLPFFQYQLTFNPNIKTMRYIIDSRNDQYLVYDPLKIAFSIGDETELKFLKESGLTGEPERINKLDGYTIYPLVRQERLRDIFNL
Other Proteins in cluster: phalp2_2282
Total (incl. this protein): 7 Avg length: 237,3 Avg pI: 7,65
Protein ID Length (AA) pI
4DAIJ 276 5,83034
1Kv27 226 5,86041
2TtG8 223 8,36028
2dkru 206 7,67511
2wMSM 222 8,31437
4BsJP 261 9,25271
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36749
6BXWz
 16 32,7% 177 3.371E-28
2 phalp2_34876
4dSN5
 40 28,4% 190 4.584E-28
3 phalp2_38873
1OvVW
 15 33,8% 189 7.272E-27
4 phalp2_11252
6Gz7I
 49 32,3% 195 2.480E-26
5 phalp2_28636
8qmsE
 11 22,9% 209 4.507E-24
6 phalp2_20523
4fPAX
 6 29,9% 204 2.813E-23
7 phalp2_28393
1rnvL
 41 30,4% 174 8.017E-22
8 phalp2_25409
2zmTv
 9 28,2% 195 6.721E-21
9 phalp2_33595
jjDT
 1 27,7% 191 9.496E-18
10 phalp2_2494
5Ecd6
 8 27,1% 173 8.548E-16

Domains

Domains
Disordered region
PET_M23
Unannotated
Representative sequence (used for alignment): 4DAIJ (276 AA)
Member sequence: 3ndfF (247 AA)
1 276 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4DAIJ) rather than this protein.
PDB ID
4DAIJ
Method AlphaFoldv2
Resolution 76.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50