Protein

Protein accession
6GD41 [EnVhog]
Representative
6GD41 (this protein)
Source
EnVhog (cluster: phalp2_4957)
Protein name
6GD41
Lysin probability
99%
PhaLP type
endolysin
Probability: 95% (predicted by ML model)
Protein sequence
VDDPLSIYDEIFEDAGKAWNVDPLLLKSIAKQESGGNAKAVSKSNAQGLMQIIPSTQKYLGVTDPFDPVQSIFAGAKYLSEGLDKEGNPEGALLYYHGGPGWRDNYGKESAAYVPAVTSHYKMLSAAQRAAQPPASPPPAAPTANLPTSPGFGPLTPVPGAPTVVSVPPMPAVNGLKPNG
Physico‐chemical
properties
protein length:180 AA
molecular weight:18724,9 Da
isoelectric point:5,30
hydropathy:-0,30
Other Proteins in cluster: phalp2_4957
Total (incl. this protein): 4 Avg length: 153,3 Avg pI: 5,16
Protein ID Length (AA) pI
2SNns 141 5,21233
5n9zr 144 5,37034
6F9M9 148 4,74972
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32498
1gRa4
 1 37,3% 134 1.056E-23
2 phalp2_11133
5t07n
 26 38,2% 136 3.286E-22
3 phalp2_11681
1NJBx
 3 34,5% 139 1.146E-21
4 phalp2_4421
2GvBa
 2 36,8% 125 1.146E-21
5 phalp2_37089
16u4b
 9 38,5% 127 1.391E-20
6 phalp2_32795
2xoLt
 8 38,9% 118 5.852E-19
7 phalp2_12203
6Ja4c
 19 33,1% 172 2.446E-17
8 phalp2_21911
4JxwN
 4 36,8% 125 6.211E-17
9 phalp2_3377
3nm4J
 1 35,5% 135 5.454E-16
10 phalp2_17677
6Ui1v
 1 35,7% 137 7.437E-16

Domains

Domains
SLT
Disordered region
Protein sequence: 6GD41
1 180
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6GD41
Method AlphaFoldv2
Resolution 85.10
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50