Protein

Protein accession
1PNdt [EnVhog]
Representative
1PNdt (this protein)
Source
EnVhog (cluster: phalp2_31082)
Protein name
1PNdt
Lysin probability
76%
PhaLP type
endolysin
Probability: 92% (predicted by ML model)
Protein sequence
MNGMEKNWYGHAKEAGILAPLGLAAALAMGGSVSQSDGAQPGEAQAPVQVAASSFTPSPKFLETLERHEGFSPKTYRDSRGVLSVGIGFNLERKNAADLLMAAGLDAEAVMSGRRPITREEAWKLANADLKTAIADARNLFRNFDSLPEGIQEVLVNMSFNLGGHKLSGFKKMRAAVEAGDWAAAAAEMEKSQWRGQVKGRAVELVAQMRAGGQTAATEDPQPETKEEVGDDTVVVRQGQTLSGIAREHLGDPRRWVELARLNGIKDPTGIKPGQKVRIR
Physico‐chemical
properties
protein length:280 AA
molecular weight:30069,7 Da
isoelectric point:7,94
hydropathy:-0,41
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8727
8l77Y
 27 41,3% 179 1.712E-31
2 phalp2_22190
6RxcX
 29 33,1% 175 1.609E-11
3 phalp2_33457
7eghX
 14 29,5% 193 1.675E-10
4 phalp2_30938
11oC8
 1 29,6% 172 3.135E-08
5 phalp2_29233
8AsmO
 14 24,0% 200 7.282E-05
6 phalp2_18717
wgOy
 1 28,3% 201 7.282E-05

Domains

Domains
Disordered region
GH24
LysM
Protein sequence: 1PNdt
1 280
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959, PF01476

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1PNdt
Method AlphaFoldv2
Resolution 75.97
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50