Protein

Protein accession
3jYk0 [EnVhog]
Representative
5X3JD
Source
EnVhog (cluster: phalp2_3793)
Protein name
3jYk0
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKIEKLSAHMSNYTPKGNRKIDYIAVHYTANNGDTAWGNCNYFSKANRNASAHYFVDEQGVWQSVEDMDTAWHCGTNGTYRHQYCRNSNSIGIEMCSKINSRGTFYIEPKTIANTQKLVKKLMKKYNIPIENVLRHYDITGKICPKPFVENKQLWVDFKERLVKDMTLEEARKIIQDNCGFDDNTMKYLDFYKYSESLILRLAEAIEE
Physico‐chemical
properties
protein length:208 AA
molecular weight:24282,3 Da
isoelectric point:8,41
hydropathy:-0,68
Representative Protein Details
Accession
5X3JD
Protein name
5X3JD
Sequence length
176 AA
Molecular weight
19963,13800 Da
Isoelectric point
5,50891
Sequence
VIHYFGSLGTAAAVANYFNTPGIQASAHYCLDEGSTVYQCVEDNNIAWHCGTSGAYVHPRCRNENSIGIEVRPYKLDKSTARSAAPADWYFPPEIVDNLVVFTQMLMQKYNVPLENVVRHYDVTGKWCPRPWMGDDTNTYYGTSGNEQWKKFKERLSGEELDMNIEEARKQLTLAP
Other Proteins in cluster: phalp2_3793
Total (incl. this protein): 59 Avg length: 189,2 Avg pI: 8,22
Protein ID Length (AA) pI
5X3JD 176 5,50891
14PeA 167 8,66998
1Nzwe 200 7,67204
1gCJh 204 9,55275
1jFvb 146 9,66802
1nYUz 213 9,28043
23P2e 178 8,35834
2Vdo6 190 7,56785
3THli 159 8,85256
3WNHK 179 8,38787
3dV91 140 9,71018
3dWnk 190 7,57569
3fQ7F 226 8,77964
3gdtN 190 8,75992
41fQ0 179 7,55188
4JXsc 168 9,09921
4L0yD 158 8,48747
4L9HQ 198 9,31608
4LcYS 179 8,88157
4khcP 190 8,47451
4kmZ1 199 9,42620
4y98i 225 5,81522
5LXsj 141 8,87074
5ODlt 201 8,43003
5OwJA 193 6,57789
5VP0y 281 6,43602
66oIF 199 8,48586
69CLe 203 7,55176
6fdgH 281 7,98481
6gDuE 185 6,57862
6vcPo 281 6,43823
71WOj 222 10,06069
7WUYt 201 8,71408
7WW9Y 198 8,69551
7YAsk 152 8,30064
82T1b 210 6,38122
82zHY 159 9,25233
83xfq 285 6,52287
85b1f 199 7,67505
88ouH 199 7,65015
89Vyd 152 8,60177
8bkmm 201 8,69545
8cyut 198 8,20459
8idPx 204 7,13076
8kQvy 199 8,54904
8lAnA 198 8,20459
8nSth 152 8,62253
8pTBW 124 9,43548
8ptva 152 8,30064
8qQnU 152 8,30064
8qfRM 201 8,70473
8rXGr 169 8,84173
8rhYp 137 9,17567
8rjLM 152 8,60177
8rl22 214 6,18683
8snjb 152 8,31998
Zngq 169 9,04970
b1y7 186 7,80469
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1605
81mMl
 270 44,0% 159 2.452E-61
2 phalp2_29669
8sfID
 1005 45,1% 166 3.910E-56
3 phalp2_24299
3nIle
 36 39,8% 163 2.033E-46
4 phalp2_8936
3ibqX
 105 32,1% 168 1.105E-43
5 phalp2_38909
238Ru
 1 29,7% 168 5.549E-34
6 phalp2_24292
3k9WX
 42 31,1% 167 1.424E-33
7 phalp2_7116
2lzss
 1 32,7% 180 1.424E-33
8 phalp2_14283
3qOze
 23 42,0% 107 8.460E-32
9 phalp2_9579
1njYk
 79 34,2% 178 3.663E-30
10 phalp2_24347
3VM62
 9 32,2% 158 9.392E-30

Domains

Domains
Ami2
Representative sequence (used for alignment): 5X3JD (176 AA)
Member sequence: 3jYk0 (208 AA)
1 176 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5X3JD) rather than this protein.
PDB ID
5X3JD
Method AlphaFoldv2
Resolution 92.93
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50