Protein

Protein accession
3gdts [EnVhog]
Representative
3iB6U
Source
EnVhog (cluster: phalp2_5499)
Protein name
3gdts
Lysin probability
94%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNCNSKRKSVLVIIGSAHGIETPGKQSPDGVFKEYKWSRMMCKRLLKRLQDDGYRAVIDHDGLNEIGLSNRAQIVNNYCSVFGNQNVVYVSIHNNAAPPNDGKWHKARNWSIFVAPNASNNSKKLASYICQEIENQEIKVRRPLPKQDWWEGNFTVLTRTLSPAVLSENLFQDNKQDVEILLSEEGQAKILEAHALGIEKYVDELVGINKNIEEK
Physico‐chemical
properties
protein length:215 AA
molecular weight:24392,4 Da
isoelectric point:8,27
hydropathy:-0,55
Representative Protein Details
Accession
3iB6U
Protein name
3iB6U
Sequence length
175 AA
Molecular weight
20015,40700 Da
Isoelectric point
6,43914
Sequence
MCKRLVKRLQDDGYRAVVDHDGLNEIGLSNRAQIVNNYCSVFGKQNVVYVSIHNNASPPNDNKWHKARDFSIFVAPTASANSKKLASYIVEEIENQEVKVRRPKKTQDWWEGNFTVLTRTLSPAVLSECLFQDNKEDVAILLSEEGQRKILEAHVKGIEKYVDELVDINKNIEEK
Other Proteins in cluster: phalp2_5499
Total (incl. this protein): 6 Avg length: 203,7 Avg pI: 7,80
Protein ID Length (AA) pI
3iB6U 175 6,43914
2VjRa 207 7,04715
3ZVrA 214 8,60029
3gcKp 205 8,05708
4MeOV 206 8,37968
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_37494
3aZmq
 1971 41,4% 169 1.226E-35
2 phalp2_7949
zu48
 832 34,3% 163 1.103E-25
3 phalp2_20954
7po03
 228 35,9% 167 7.647E-20
4 phalp2_25147
1GsF1
 21 31,7% 129 6.012E-18
5 phalp2_33525
85Tz
 32 31,8% 160 3.431E-16
6 phalp2_13020
42XXy
 16 33,5% 137 1.621E-15
7 phalp2_22711
8625G
 10 32,1% 140 1.621E-15
8 phalp2_9764
85YdS
 1 23,3% 154 1.082E-12
9 phalp2_22979
3p5T3
 17 29,6% 162 2.006E-12
10 phalp2_38987
84xdy
 117 29,8% 144 1.276E-11

Domains

Domains
Ami3
Representative sequence (used for alignment): 3iB6U (175 AA)
Member sequence: 3gdts (215 AA)
1 175 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3iB6U) rather than this protein.
PDB ID
3iB6U
Method AlphaFoldv2
Resolution 95.01
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50