Protein

Protein accession
3gbMp [EnVhog]
Representative
7ckBP
Source
EnVhog (cluster: phalp2_24813)
Protein name
3gbMp
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSYPFRQAKSISYKGTRSLSKIYYIVIHYTAGNGDTAKNNVDWFATGNPRNAGAHFFVSQNGDTWQSIKLENSANSVGGFVTSKYGAASYYKKCLNSNSVSIELCDNLNKDPSVQQTAAVKELVKYIQSKCPNAKTILRHWDVSGKPCPVRMTGTDNSKWINFKKAITDGATLANYSTVVTSTPGTLKVDGIAGPKTIKAWQYILKTPVDGVISSQFTSLKKYHIALKSVTYGSYGSPMVDAIQETLGLEKDGQMGPVTIKKIQERIGAGVDGYFGPETARKLQERLNTGKF
Physico‐chemical
properties
protein length:292 AA
molecular weight:31955,0 Da
isoelectric point:9,57
hydropathy:-0,40
Representative Protein Details
Accession
7ckBP
Protein name
7ckBP
Sequence length
309 AA
Molecular weight
34822,16310 Da
Isoelectric point
9,80205
Sequence
MAWIKNKVFKNGTEFVKWLDKNFGKYIEDHISELHVHHTWKPNHSNKQSLLQLHENMRHYHVGTRGWQDIGQHVSIGKNGDAALGRDIKIMPASAFGHNGTPNWHPFMFEMIGDFDKGHDKLDGDQLDTVMAISQYFNNKGKKIRFHREMDNHKSCPGTGISKDWYMAKVTGKKVTQNESAPKVEIKSSTTKKSKTKANLKVDGKWGNSTTEALQKALGTTQDGIISNQYDNRITRAFYGTTIHFSDGKKGSMVVKSMQSKIGSNVDGLLGPNTIGRLQQNLGTPYDKKLSRPSAVVKELQRRLNAGKF
Other Proteins in cluster: phalp2_24813
Total (incl. this protein): 35 Avg length: 313,5 Avg pI: 9,12
Protein ID Length (AA) pI
7ckBP 309 9,80205
19nIR 289 9,22879
1r3O0 395 9,46075
2A26B 365 8,82342
3TN0c 233 9,85079
3TQwI 292 9,31009
3VIOD 291 9,28733
3WM6n 231 9,84034
3gjbW 291 9,48783
3hQXZ 285 7,74928
41e0H 254 9,24195
4MU3I 335 8,19008
4SELm 370 9,43406
4SFdz 378 9,31048
4SZsU 295 9,26580
4l1ax 333 9,66241
4n4Rd 288 9,12365
4oskN 274 8,95880
4tQ21 336 9,67498
5i3OS 279 8,45137
69boQ 267 9,33710
752Sn 263 4,94166
79KhK 284 7,05317
7cOoc 335 8,91503
7cbNN 335 9,11752
7cnMW 408 9,30841
7d5ZD 422 9,64462
7g3iK 287 9,19127
7i7It 268 10,10866
7i820 335 9,93679
7ovel 284 9,35702
7vL6P 278 9,57054
7wMNu 393 9,78193
bkbq 398 9,36095
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20186
81dUU
 2 45,2% 212 7.739E-68
2 phalp2_36904
7xR8d
 63 21,9% 273 2.390E-30
3 phalp2_38765
1eieW
 18 28,8% 288 6.342E-25
4 phalp2_36521
1qwup
 277 21,7% 271 3.902E-24
5 phalp2_2920
NQqI
 114 19,9% 221 7.050E-18
6 phalp2_26920
4uKrS
 7 23,9% 259 6.663E-14
7 phalp2_15057
7s7pP
 172 19,8% 232 1.289E-10
8 phalp2_784
240oa
 2 17,3% 271 9.570E-08
9 phalp2_13210
2JwXt
 44 19,9% 256 1.657E-06

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 7ckBP (309 AA)
Member sequence: 3gbMp (292 AA)
1 309 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3gbMp
Method AlphaFoldv2
Resolution 93.10
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7ckBP) rather than this protein.
PDB ID
7ckBP
Method AlphaFoldv2
Resolution 89.48
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50