Protein

Protein accession
3gRfE [EnVhog]
Representative
4yt2F
Source
EnVhog (cluster: phalp2_10891)
Protein name
3gRfE
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTADEIIALARTQVGVSEDPPGSNNIVYNTEYYGGPSNLPWCVVFIWWLFKHAGASYLFCGGNKTAWCNYVRDWAQAHGQWVTEDYRPGDIVLYNWNSDDELDHIGLVVEAHGNSLTTIEGNEGDKVSVCARGGLTVTGAYRPKYSSGSAPAAPSEPAAPTYEDPDSPGTYTVKSGDMLGLIALAHGTTIAELARINNIPDPNRIYPGQVLILPGHEAPAEPEPEPEPVDDEAARITTLARDVIAGKYGNGLTRVLKLGKDYKSVQAEVNRLLAEA
Physico‐chemical
properties
protein length:276 AA
molecular weight:29813,9 Da
isoelectric point:4,68
hydropathy:-0,31
Representative Protein Details
Accession
4yt2F
Protein name
4yt2F
Sequence length
302 AA
Molecular weight
32592,45480 Da
Isoelectric point
9,73835
Sequence
MGITAKDVIGTAEKYVGVHGNPIGSHNVKFNTDYYGKAVSGSNYLWCVVFVWDIFRLAGASHLFYDGGKVSVCSKVRAWAEKNKLTVDKSQGQYGDVAIFDWNADKIPDHIGFITGKNADGSYNTIEGNTSSASNSNGDTVARRVRYQKNILYMFRPKYDTGVVQNVKSTITTTKTTTSTSTSTSTGTYTVVKGDTLSGIGTKLGVAWKTIASLNNIKSPYTITVGQKLKIPTTTTTSTSYKAKVTSTIGVNIRKTANADSTKLGAIPYGKEITITGTSNGWGKTTYNKITGWVSLAYIKKV
Other Proteins in cluster: phalp2_10891
Total (incl. this protein): 36 Avg length: 258,7 Avg pI: 7,20
Protein ID Length (AA) pI
4yt2F 302 9,73835
138BY 238 9,93324
19mLJ 254 4,87715
2ViUr 229 8,88305
3PDo7 234 5,76850
3TP3J 293 8,61028
3ZEHT 276 4,79098
3fUTm 248 4,56260
3gOX5 293 5,16254
3gbfG 298 9,21358
3j0dK 265 4,84884
3j3Ew 277 5,24359
405h0 251 4,38640
40dCa 263 4,47876
40hm6 262 4,87601
4yuUk 305 9,70464
5C0TC 238 6,84452
5Y6Rc 254 5,79612
65aMR 254 5,97181
69uRK 254 5,97107
6MMZa 234 4,96906
6hHUm 254 6,17501
6kVIJ 254 5,97181
6nZrR 254 6,72811
7Vkud 252 9,24556
84Tyi 254 9,30093
85EXc 254 7,49083
8869x 254 9,23331
8nT5L 254 9,15988
8nzwl 252 9,24556
8pTp1 252 9,24556
8qOCn 254 9,29023
8rYnh 253 9,15981
ngk1 238 9,91532
nlJE 237 9,86445
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2876
ow4G
 2 38,0% 197 1.348E-55
2 phalp2_4990
6T9tm
 8 31,0% 238 1.994E-32
3 phalp2_9136
6d0dy
 3 23,7% 291 4.298E-31
4 phalp2_22977
3nWzh
 3 29,0% 303 6.782E-30
5 phalp2_15188
xzEU
 42 24,1% 327 3.616E-28
6 phalp2_11181
5Pvnh
 15 25,2% 305 1.664E-27
7 phalp2_20813
65GA0
 344 26,1% 222 1.184E-25
8 phalp2_4061
1gHkc
 4 24,4% 192 8.301E-24
9 phalp2_29393
1dfbb
 105 27,4% 248 8.301E-24
10 phalp2_13490
4Oiht
 65 24,1% 319 5.738E-19

Domains

Domains
CHAP
LysM
SH3_3
Representative sequence (used for alignment): 4yt2F (302 AA)
Member sequence: 3gRfE (276 AA)
1 302 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF05257, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4yt2F) rather than this protein.
PDB ID
4yt2F
Method AlphaFoldv2
Resolution 83.92
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50