Protein

Protein accession
3dV4s [EnVhog]
Representative
7DH9G
Source
EnVhog (cluster: phalp2_35905)
Protein name
3dV4s
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTEQQIRNKVADIITSWVGATRGSTIHKEILKIYNSYKPLPRGYKLTESDAWCAATVSAAWIKADVAKICPIECSCSKMIEIAKSMNIWVEDDKYVPKIGDAIIYDWDDSSNYANTDNKNVPDHVGIVIAVYDNSFIVAEGNMNVDGIRKVGKRTMKVNGKYIRGFVTPNYASLATKKSIDEIAHEVIRGLWGNGLVRKTRLRLAGYNPDEVQKRVNEILNGQSSYIIYTVQNGDTLGKIAKKYNTTYQKIAKDNNIKNPNLIYTGQKLKIYK
Physico‐chemical
properties
protein length:273 AA
molecular weight:30736,9 Da
isoelectric point:9,35
hydropathy:-0,41
Representative Protein Details
Accession
7DH9G
Protein name
7DH9G
Sequence length
267 AA
Molecular weight
29316,49180 Da
Isoelectric point
9,38158
Sequence
MNVTELRNKVVSIMSGWIPSGHADILNIYNSYKPLPRNYKMKMADPWCAATVSAAWIAAGVASICPIECSCSKIIEKAKKLKIWVEDDKYVPKPGDALIYDWDDGTNYASTDNQGNPDHIGIVKKVSDGKIVVIEGNLKGSDGIRKVGTRTINVNGRYIRGFVTPDYAKIADPDKTVRELAIEVIAGKWGNGAVRKSRLTAAGYDYDKVQAEVNKIYYSPTGKPLDEIAREVIAGKWGNGAVRKSRLKAAGYDPVVIQAIVNKMLKK
Other Proteins in cluster: phalp2_35905
Total (incl. this protein): 6 Avg length: 268,3 Avg pI: 9,24
Protein ID Length (AA) pI
7DH9G 267 9,38158
20BYo 270 8,99374
3dZTI 269 9,26902
5PEoQ 257 9,28675
7YkEt 274 9,13486
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23993
40d9r
 21 52,0% 250 1.435E-89
2 phalp2_24033
810r1
 150 47,6% 231 2.752E-83
3 phalp2_15661
2WFec
 420 51,5% 188 6.471E-76
4 phalp2_25577
3Q2DF
 166 50,0% 188 3.122E-72
5 phalp2_30942
13AWP
 189 52,0% 169 5.851E-72
6 phalp2_27238
3TMvJ
 21 55,4% 182 4.237E-63
7 phalp2_32863
38KGa
 2 43,0% 186 1.419E-53
8 phalp2_29481
1Jfam
 8 37,6% 194 1.220E-36
9 phalp2_5770
7IG38
 1 34,3% 230 3.384E-32
10 phalp2_4325
8fzRl
 2 30,2% 208 1.944E-24

Domains

Domains
CHAP
CW_7
CW_7
Representative sequence (used for alignment): 7DH9G (267 AA)
Member sequence: 3dV4s (273 AA)
1 267 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3dV4s
Method AlphaFoldv2
Resolution 94.46
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7DH9G) rather than this protein.
PDB ID
7DH9G
Method AlphaFoldv2
Resolution 93.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50