Protein

Protein accession
5ycsp [EnVhog]
Representative
5ycsp (this protein)
Source
EnVhog (cluster: phalp2_25873)
Protein name
5ycsp
Lysin probability
65%
PhaLP type
endolysin
Probability: 52% (predicted by ML model)
Protein sequence
MEYNAQELEKLFEETPMAPVVTTSVSTSQYAANRAKEMAGRIKTPDQAVNDSDNDIILYGETDPDAVEESTDLDDSFKTNLIEGLKIRENSLMKNWNEETERWYPYEDDDGWSIAFGHFITDPAEVERLKQEGITMDEALETLNDDYEEHLARTRRLITNFDELPDDLKAGLVDSVFNGFLSQSPKTIALINEGKFLEASEELVTGSIISKDYKEKPGTKNRVDVLRNPLIKYGKLQKK
Physico‐chemical
properties
protein length:239 AA
molecular weight:27195,9 Da
isoelectric point:4,46
hydropathy:-0,72
Other Proteins in cluster: phalp2_25873
Total (incl. this protein): 59 Avg length: 237,5 Avg pI: 7,49
Protein ID Length (AA) pI
122nI 253 4,51270
157GZ 223 9,73326
165R2 223 9,73655
1NL8m 218 9,50369
1NXq1 224 9,63636
1amug 253 4,41323
1pTXn 224 9,44032
1u359 271 4,09419
1xMFV 253 4,40561
1yLg 249 4,47706
27efg 224 9,52232
2jhSJ 219 9,26722
32QuT 219 9,36199
32f29 218 9,48654
38soN 221 9,66247
39LoX 270 4,05003
3QviT 267 4,10283
4CW6A 239 6,83565
4DfUb 219 9,58337
4IKh2 217 9,50369
4TOGW 305 4,37850
4mhkQ 218 9,48654
4rdZG 218 9,50369
4vRe7 258 4,32018
58DqE 219 9,52142
5bihz 219 9,36218
5coaT 220 8,98672
5febB 221 9,61722
5gBUL 218 9,53753
5gGs2 218 9,38191
5mcB3 222 9,50343
6GSoB 223 9,71476
6GWKQ 222 9,52142
6IJ6e 221 9,58369
6Ls5H 219 9,58337
6NaqV 228 9,04944
6TZHS 218 9,11108
6VSbO 218 9,23904
6yj1q 222 9,65441
6zwI 286 4,05003
7LUDq 243 9,72926
7T3Ti 246 4,49059
7TjPx 263 4,16433
83RRh 271 4,06526
8bc2b 269 4,19792
8kj6v 271 4,11517
8nxGS 222 9,63553
8uEcY 239 4,51548
C3Ly 226 9,15588
LQsw 224 9,53682
SC8e 218 9,47023
Tp8x 267 4,11829
WQTn 284 4,13540
Y8D1 269 4,08214
dYvp 270 4,05003
jTxA 219 9,55442
qCeY 224 9,63636
rLC9 253 4,45597
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_22891
2Rxk6
 7 26,9% 167 1.304E-34
2 phalp2_27983
XBT4
 216 24,6% 158 5.817E-22
3 phalp2_2049
2CmXK
 1 19,0% 168 1.150E-11
4 phalp2_14190
2HlVZ
 1 21,5% 167 9.302E-11

Domains

Domains
Disordered region
Unannotated
Protein sequence: 5ycsp
1 239
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5ycsp
Method AlphaFoldv2
Resolution 74.56
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50