Protein

Protein accession
3dPt1 [EnVhog]
Representative
40Xl7
Source
EnVhog (cluster: phalp2_3101)
Protein name
3dPt1
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MRYPVNEIYIANKFSSTHRGIDLGYFDDYNQPVYSANSGKVISIQKQATGGNVIHIRHTKQGMQLLPFVSEYAHLKTGSICVKVGDYIKKGQKIALMGNTGQARGYHLHYGLYAGTYIDYKVDRWLDPVKYLCVYKNQSVYEGTKKLYYLNYTKIARGIPKTEIGEAMYVRHKNKEIVGRIYNGEEVEYFGTKRYFPKLTKLAVVDALLEYTSVDKYLYDS
Physico‐chemical
properties
protein length:221 AA
molecular weight:25439,9 Da
isoelectric point:9,35
hydropathy:-0,45
Representative Protein Details
Accession
40Xl7
Protein name
40Xl7
Sequence length
210 AA
Molecular weight
23989,27200 Da
Isoelectric point
9,57228
Sequence
MQYPVNEINIRQEYSASHKAVDLGWTDSVGKNQKVYAAARGEVIGIYKQNLGGNVIRIYHKELNCITEYAHLQDNSIRVKKGTRVLEGEWIANMGATGKVTGPHLHFAMVKGSKYIESKRIDPIKYIARYPWQHVADNSKAKSKIYSTKTAKDIPSEPLLVHNKMNYSRLSVVKDFKIYNNEYVPYFGASGSFAIVDNLNKYYCCKRFLK
Other Proteins in cluster: phalp2_3101
Total (incl. this protein): 22 Avg length: 219,8 Avg pI: 9,44
Protein ID Length (AA) pI
40Xl7 210 9,57228
2fXbh 164 9,66724
3PvPP 208 9,60716
3TS7n 215 9,72720
3dOcR 219 9,61735
3dSeg 216 9,43845
3dV6S 217 9,47113
3fKXh 299 9,27979
3gHeA 213 9,40325
3gawp 215 9,63011
3h4Ij 211 9,53218
3ioOG 276 9,29004
3iyps 212 9,56422
40eTE 213 9,43851
4ya74 273 9,24614
5OH9D 205 9,46649
5VX5n 205 8,36285
6cxFw 202 9,60806
6qNVi 206 9,53250
7Jw9c 229 9,65145
82GGc 207 9,11920
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8911
3e0gm
 36 38,7% 155 3.523E-41
2 phalp2_13280
3inuw
 7 40,3% 161 2.313E-40
3 phalp2_20474
3PXay
 1 38,6% 163 6.409E-35
4 phalp2_5376
2tuIf
 1 27,6% 195 6.758E-30
5 phalp2_11968
2Vbt8
 1 30,8% 178 3.899E-23
6 phalp2_26409
1HyTi
 1 33,1% 151 3.560E-20
7 phalp2_36747
6BM9K
 381 25,1% 203 2.320E-17
8 phalp2_39908
1iVNq
 39 28,2% 223 4.293E-17
9 phalp2_39871
17EO3
 18 30,2% 139 1.080E-16
10 phalp2_15540
8qQUm
 26 28,0% 196 1.080E-16

Domains

Domains
PET_M23
Disordered region
Representative sequence (used for alignment): 40Xl7 (210 AA)
Member sequence: 3dPt1 (221 AA)
1 210 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3dPt1
Method AlphaFoldv2
Resolution 88.94
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (40Xl7) rather than this protein.
PDB ID
40Xl7
Method AlphaFoldv2
Resolution 78.41
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50