Protein

Protein accession
5vm8a [EnVhog]
Representative
5vm8a (this protein)
Source
EnVhog (cluster: phalp2_39525)
Protein name
5vm8a
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VAADYNKTVKRIDVGTWDEGGYNNRDANGAPGKKSNHASGTAIDLNWSEEGAQGSSWGKRFFAQAKHQLAIQAMKRRYGKWVQWGGDWRAKDYMHWEIKPGVSAVDLKAACYKLGINEDGVRS
Physico‐chemical
properties
protein length:123 AA
molecular weight:13702,1 Da
isoelectric point:9,38
hydropathy:-0,83
Other Proteins in cluster: phalp2_39525
Total (incl. this protein): 9 Avg length: 149,4 Avg pI: 9,84
Protein ID Length (AA) pI
157s7 173 9,71166
18POE 164 9,70960
1LtuH 163 9,79650
1MNa0 108 9,48157
1sSnK 118 9,58343
22SQC 163 10,87886
25gXt 165 9,62663
lygA 168 10,38884
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15931
4J3RB
 2491 49,6% 131 3.171E-35
2 phalp2_30232
4bLvY
 16 32,2% 96 2.219E-08
3 phalp2_24161
2h6J3
 2 29,5% 122 1.564E-05
4 phalp2_17515
5xQcO
 25 26,7% 116 1.878E-04
5 phalp2_21903
4HPcQ
 2 29,5% 88 2.560E-04

Domains

Domains
PET_M15
Protein sequence: 5vm8a
1 123
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5vm8a
Method AlphaFoldv2
Resolution 95.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50