Protein

Protein accession
1NmkF [EnVhog]
Representative
1NmkF (this protein)
Source
EnVhog (cluster: phalp2_28446)
Protein name
1NmkF
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKRLIATFVLLFSLLSLFASPAAAYTFPPIIQVPSPNFDAGRDGYTIDHIILHTTEGSFDSAVGWLSNPASGGSAQYIVNADGTRLIQLVQDKDTSWGAGNIEYNRRSINIEQEGYASRGGFSDGLYETVGQLVGRLALTYHIPLDRQHVIGHMNVPDPNHPDQFGGGSHHNDPGPYYDFDKVLTIAQAYEDSQSPAQAEPCTYYPQTGFSACYGFRAFYDSFGDNAVGLFGYPISSEFQINGVTMQYFERARFEWHPDTPGYPNNPYHVQLGLIGTENFTTGGN
Physico‐chemical
properties
protein length:285 AA
molecular weight:31388,2 Da
isoelectric point:4,85
hydropathy:-0,34
Other Proteins in cluster: phalp2_28446
Total (incl. this protein): 2 Avg length: 306,0 Avg pI: 5,37
Protein ID Length (AA) pI
1X3IQ 327 5,89587
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9233
6TsmW
 1 34,9% 206 8.820E-72
2 phalp2_36680
5IgYI
 34 28,0% 182 1.241E-19
3 phalp2_11245
6EoH4
 30 30,3% 211 1.678E-19
4 phalp2_20380
2Zh2E
 30 26,3% 266 1.678E-19
5 phalp2_24509
4NPVU
 68 32,3% 204 5.599E-19
6 phalp2_31626
4C5ft
 15 28,3% 208 6.813E-17
7 phalp2_16372
5GLME
 1 26,5% 282 1.814E-15
8 phalp2_14674
62rpR
 8 29,5% 186 1.452E-14
9 phalp2_30839
hrmn
 37 23,8% 285 5.313E-12
10 phalp2_18569
7cxQw
 45 25,1% 235 3.185E-10

Domains

Domains
Ami2
Unannotated
Protein sequence: 1NmkF
1 285
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1NmkF
Method AlphaFoldv2
Resolution 87.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50