Protein

Protein accession
3Yks3 [EnVhog]
Representative
1q2Yq
Source
EnVhog (cluster: phalp2_21268)
Protein name
3Yks3
Lysin probability
98%
PhaLP type
endolysin
Probability: 89% (predicted by ML model)
Protein sequence
MIRLKSLLSESLIDDPEFRDKVKEWEGKVTDENGLHVTYDDATMRPVKSSKQVQGVVTIGYGTTKSIYPQLKPGMKISEKQAESLLTKGIQKIESDVKRRIPKYDSYPKYIQMAIMNSSYRGDLGPATIKLINSGQWNKVSKEYLNHPNYINPGNLRGVVIRMKSNADAFDRYAQELKNKKSADAYGHGEQYMTIGKTLYPRKTSKHDYANVRNAPTINNGIVNNIIATIEWPNPVGVAKKKKTDDRMMTWYYVELPKNISLLHDHGWVRFDAVTIDKNAKFV
Physico‐chemical
properties
protein length:283 AA
molecular weight:32289,6 Da
isoelectric point:9,57
hydropathy:-0,67
Representative Protein Details
Accession
1q2Yq
Protein name
1q2Yq
Sequence length
315 AA
Molecular weight
35139,63020 Da
Isoelectric point
9,43058
Sequence
MIRLKSLLNEDILDSSFLSYIKDVEGAVKDSASKLHKAYKDSVGVWTIGYGHTGDDVKPATKWPESKAEYHLKADLYDSINKVKEYVSQNFPGKVLDTDQLKMLTDIAFNVGSLRKFPTFTKAVVNKNWKEAVKHYKRYAGGKELTRRNTKFYDTFLKPKLTAAAVTSTSNNATNVTPKVLTASDLIGKTIYPKPGTNYANVRETAVVDNGMFDNLLTTVYWPNAIGIVKSVKKGEDSKQWCYVKLQSGEYGYVRTDVIKTTNSKYHIVKAGDTLLQIAVDNGLTLDGIIGINGFSNIQGQYNDSIQPGQKIRLR
Other Proteins in cluster: phalp2_21268
Total (incl. this protein): 46 Avg length: 288,2 Avg pI: 9,58
Protein ID Length (AA) pI
1q2Yq 315 9,43058
18oKC 321 9,64623
1wYlK 283 9,57634
1wZNW 326 9,67311
310cR 273 9,12481
32XOf 292 9,59942
3T7wH 273 9,13448
3UoW2 352 9,75086
42dGN 349 9,79057
43rOf 283 9,47152
44tgQ 244 9,97643
4ApJ5 265 9,31853
4Nv2s 286 9,77252
4n7aI 352 9,76201
56s28 250 9,37668
5BOms 294 9,79579
5BT6o 252 9,55101
5cQyU 331 9,58337
5cXBg 283 9,32202
5dj0N 321 9,41898
5dsnh 260 9,60671
5eVxR 250 9,57177
5fov5 294 9,80495
5fs9R 320 9,61825
5y5JR 283 9,47152
5zUh9 255 9,31467
6Q4kt 303 9,16497
6x6zR 284 9,81275
6xVFt 286 9,58208
6xgft 284 9,63843
6xhBw 283 9,87019
6xx6T 250 9,53915
6yzJt 259 9,22119
7QPf 281 9,85575
8Blvw 287 10,09802
FKJG 283 9,58053
ITUu 235 9,93666
JGdl 278 9,66602
JKKI 331 9,57241
KVz4 241 9,79392
MGto 283 9,40821
TPoh 324 9,40776
UgpH 349 9,73951
e9Fq 250 9,67466
eawK 278 9,25355
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15351
1z9iz
 1 21,4% 242 1.288E-46
2 phalp2_12171
6x91f
 31 24,4% 352 1.351E-44
3 phalp2_2417
54NV4
 1 20,5% 345 3.202E-29
4 phalp2_17880
v3wn
 54 20,4% 279 1.117E-16
5 phalp2_1915
4hcut
 54 24,7% 291 1.241E-14
6 phalp2_30084
2YvPg
 3 26,6% 296 2.988E-14

Domains

Domains
GH24
LysM
Representative sequence (used for alignment): 1q2Yq (315 AA)
Member sequence: 3Yks3 (283 AA)
1 315 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959, PF01476

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1q2Yq) rather than this protein.
PDB ID
1q2Yq
Method AlphaFoldv2
Resolution 74.35
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50