Protein

Protein accession
3YMsj [EnVhog]
Representative
7WW8c
Source
EnVhog (cluster: phalp2_834)
Protein name
3YMsj
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MIRLKQLLQEDIENTSAAKSTPEEESGGDYQLLYDGWLNRGTTAAKYLVAKGYNKIIAAAFIGNFAVESGVRPNVSQNLTKGLKLGFGFKPTTPAEALKQPSKSGYGLAQWTEDRKTKLVAAGATTTTQQLDFLIAELKGSQSSAWEKIKSKKTLSDATAAVVKYYERAGVPALAERVSKATDIYNQIK
Physico‐chemical
properties
protein length:189 AA
molecular weight:20526,1 Da
isoelectric point:9,43
hydropathy:-0,40
Representative Protein Details
Accession
7WW8c
Protein name
7WW8c
Sequence length
139 AA
Molecular weight
15324,72470 Da
Isoelectric point
9,41001
Sequence
MSSNETSSNETSSNDIVNFFISKGLTKNQAKGIYGNIMQESGGRNNAKSSDGHNSYGLAQWTGARKARLFSKYGTSPSTQQQLEFLWEELNSSEKGALNALKNTSTVEDATKVFCQKFERPANWAANLKNRLKYANSIA
Other Proteins in cluster: phalp2_834
Total (incl. this protein): 6 Avg length: 170,8 Avg pI: 9,32
Protein ID Length (AA) pI
7WW8c 139 9,41001
1AMfN 186 9,72681
2VdT5 141 9,05202
5x9kX 185 9,04680
6zx0q 185 9,23975
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38703
RRrH
 1 42,3% 118 6.392E-25
2 phalp2_16649
gxef
 1 36,2% 124 1.681E-21
3 phalp2_17072
2f2jb
 9 40,1% 132 1.886E-19
4 phalp2_3546
4AJc3
 7 38,8% 126 6.638E-19
5 phalp2_16254
7Fv2D
 1 37,6% 125 2.108E-17
6 phalp2_5269
8e5oF
 72 29,9% 127 5.410E-17
7 phalp2_22748
89IiP
 3 32,5% 126 1.388E-16
8 phalp2_17143
2STSP
 4 38,1% 110 2.602E-16
9 phalp2_16088
4aMjC
 1 39,4% 109 1.711E-15
10 phalp2_6943
2SsmN
 26 32,6% 144 2.342E-15

Domains

Domains
Phage_lys2
Representative sequence (used for alignment): 7WW8c (139 AA)
Member sequence: 3YMsj (189 AA)
1 139 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3YMsj
Method AlphaFoldv2
Resolution 82.86
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7WW8c) rather than this protein.
PDB ID
7WW8c
Method AlphaFoldv2
Resolution 91.96
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50