Protein

Protein accession
3Y6oQ [EnVhog]
Representative
6IrvD
Source
EnVhog (cluster: phalp2_27684)
Protein name
3Y6oQ
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MINLLYPFEKEYPITQTYQEHKNWAIAHNYCWKSESGCTRYYFPGIDFGTPVGTKLLASIDGKVTLTKETTGYGWSIKLIDSLGNKIVYGHLSKFIVTQGQTVTRGMVIGLSGGAIGDIGSGNSSGPHLHWEYRMNEIPIDPFPLISVQPITNDLVIGKSAYIQSNVGANLRTNIGSTIALIYHETEVMITGSPIIMRGLKYYPVILNGYIAKDNGSGNIILNQ
Physico‐chemical
properties
protein length:224 AA
molecular weight:24664,0 Da
isoelectric point:7,75
hydropathy:-0,06
Representative Protein Details
Accession
6IrvD
Protein name
6IrvD
Sequence length
225 AA
Molecular weight
25357,75740 Da
Isoelectric point
8,34732
Sequence
MIQLLYPFKKQYQVTQTWQEHKDRAIKNGWCWKPGSNCTQWYYPGIDFGSPIDVELLASIDARVTLRKENTGYGWSTDLDDGQGNRIIYGHLSKFLVEQGQIVKKGHIIGLSGGAKGTVGAGTSTGPHLHWEYRKDGIPTDPTPFIEALQPLDDVHVGNVMKFISTPRIRTAPVLCPDNIMGIILPVTNMVEVREIRTIGSIIWGRFDNLWIALKEGNVKYYDKS
Other Proteins in cluster: phalp2_27684
Total (incl. this protein): 3 Avg length: 219,0 Avg pI: 7,24
Protein ID Length (AA) pI
6IrvD 225 8,34732
4Zd0J 208 5,62771
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28378
1lkGC
 5 35,4% 220 2.050E-34
2 phalp2_33390
6Q97d
 9 37,0% 154 5.639E-27
3 phalp2_2494
5Ecd6
 8 33,9% 171 1.713E-25
4 phalp2_3069
23Hwh
 18 31,0% 216 7.052E-24
5 phalp2_38873
1OvVW
 15 34,1% 155 1.865E-19
6 phalp2_24251
361WA
 36 32,1% 190 1.585E-16
7 phalp2_27905
l4Bb
 39 35,2% 159 3.964E-16
8 phalp2_19030
17y4D
 9 30,2% 142 1.286E-13
9 phalp2_24479
4HyVk
 2 32,6% 150 2.357E-13
10 phalp2_38858
1KtXW
 8 32,3% 139 3.191E-13

Domains

Domains
PET_M23
Representative sequence (used for alignment): 6IrvD (225 AA)
Member sequence: 3Y6oQ (224 AA)
1 225 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3Y6oQ
Method AlphaFoldv2
Resolution 68.08
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6IrvD) rather than this protein.
PDB ID
6IrvD
Method AlphaFoldv2
Resolution 77.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50