Protein

Protein accession
5nCYD [EnVhog]
Representative
5nCYD (this protein)
Source
EnVhog (cluster: phalp2_33231)
Protein name
5nCYD
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAIMKVSDLNGLGISLPTSIEYKPAGTPGGAITPRVVIFHVDATKGIPQPHDGLEWHFFIDFDGAITQVVDTHLRADANYHANPFAISVETAGLAAGLWTPQQLNSMAAIAIWAHKLHAVPLKRCEKWDGSGLGFHTMWGAPSQWTPVAKSCPGPDRKIQFDREFMPLINKLILTPKKDEPMQIPSHFHVAQDGPTPRPTFLVQGDYSYMNWVVGPDHQKGLVWLNALSPFLSSPDATPMPTTFLKYIPIMGPKPEGW
Physico‐chemical
properties
protein length:258 AA
molecular weight:28418,4 Da
isoelectric point:6,58
hydropathy:-0,14
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31597
4osFp
 9 34,7% 187 5.050E-20
2 phalp2_16991
80xHs
 2 28,7% 195 6.479E-12
3 phalp2_9240
6UXx2
 2 27,1% 195 1.251E-10
4 phalp2_30972
1fvaq
 54 30,5% 170 1.454E-05
5 phalp2_3920
6XlTh
 1 24,2% 227 1.929E-04

Domains

Domains
Ami2
Disordered region
Protein sequence: 5nCYD
1 258
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5nCYD
Method AlphaFoldv2
Resolution 72.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50