Protein

Protein accession
5mds4 [EnVhog]
Representative
5mds4 (this protein)
Source
EnVhog (cluster: phalp2_35975)
Protein name
5mds4
Lysin probability
96%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MNVTSPYGPRDPIYTANGITSNFHFGVDFWTPEEQPLLIAMTDGVVRISAAGDGMVGNWIRVENDEYSWDYYHLDQPSPLKIGDDVVAGQVVGQVGATGMATGPHLHLGIQQNGSTVDPMPFLVGGAPSASITPEFRPSPPLFSELGTSLVMFTGGTSTDIENLARQAGATGAWVQDKTGKFQLLIVDGPDFMRQLFDSAFPTPFGVCAISLTKELGGM
Physico‐chemical
properties
protein length:219 AA
molecular weight:23368,1 Da
isoelectric point:4,39
hydropathy:-0,04
Other Proteins in cluster: phalp2_35975
Total (incl. this protein): 2 Avg length: 235,0 Avg pI: 4,52
Protein ID Length (AA) pI
tBAr 251 4,65246
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_19389
2lm87
 43 33,5% 161 1.434E-11
2 phalp2_24228
2SnS7
 7 34,2% 146 1.939E-11
3 phalp2_27522
5hQNe
 27 30,7% 179 2.622E-11
4 phalp2_36887
7ub2Y
 40 35,3% 147 6.475E-11
5 phalp2_38843
1GkNP
 11 33,7% 145 2.157E-10
6 phalp2_2348
4TuWR
 59 30,4% 174 2.912E-10
7 phalp2_12756
81A2v
 30 33,5% 149 3.475E-08
8 phalp2_5960
6wXhv
 1 30,7% 153 2.190E-06

Domains

Domains
PET_M23
Unannotated
Protein sequence: 5mds4
1 219
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5mds4
Method AlphaFoldv2
Resolution 84.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50