Protein

Protein accession
5lDDP [EnVhog]
Representative
5lDDP (this protein)
Source
EnVhog (cluster: phalp2_14602)
Protein name
5lDDP
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
LPQSSNKPSPFKWKAAPTPSDPDHVTILEGWDRLNITSFACEELARWTHGKSRIVTMNHQCRESFLGLWAAWEKDGALERFKSDYTPAPTRAIVHDGWAGAYNPRYKRGVAHDQNPNHLSNHASGHAFDIAAQRYPLGREIPGPDLIHLLVPIAKSYGWRWGGEFTRRDGMHFQHETSPFT
Physico‐chemical
properties
protein length:181 AA
molecular weight:20564,8 Da
isoelectric point:8,61
hydropathy:-0,71
Other Proteins in cluster: phalp2_14602
Total (incl. this protein): 44 Avg length: 232,3 Avg pI: 8,22
Protein ID Length (AA) pI
10FbB 259 6,97081
15mS6 260 6,97837
19zPN 261 8,48109
1AFmB 192 9,37017
1FBw3 174 10,12897
1PZHp 262 8,94488
1QzdH 261 9,06434
1XVFq 262 9,00096
1XYIf 262 8,66850
1ZyAZ 262 8,96602
1b7JB 196 5,51556
1iLKr 262 8,94488
1pZET 262 6,97303
2umsP 169 9,47255
2wNhE 167 9,60542
3638i 204 5,87700
3TXGo 262 6,20047
3dCeH 180 8,71917
47uga 262 6,58891
4K6bf 161 9,45869
4KsVC 184 9,98591
4KsrP 167 10,54782
4LVY8 270 8,88666
4N443 176 6,63256
4bbhP 262 8,88963
4crF0 277 5,97397
4gLaq 269 6,91869
4muE1 180 9,33304
4oST8 253 7,88141
50mlX 281 9,04487
5EXNE 172 8,53015
5HkqW 262 8,92508
5IXD5 255 8,94932
5kNDv 240 9,23092
5kyMK 265 7,11388
5vGIq 262 9,21732
6VIuE 275 6,43926
8k95E 186 8,58521
9ops 270 8,57612
dPgp 177 5,94714
x9Sf 262 7,80546
x9Sg 262 7,80578
xgEi 252 7,82171
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35615
1iltm
 50 28,5% 168 4.790E-43
2 phalp2_23014
3S8Y1
 5 19,5% 169 7.705E-21
3 phalp2_28777
4SR8r
 700 26,5% 147 6.831E-20
4 phalp2_35627
1l2XB
 20 24,2% 157 1.355E-17
5 phalp2_19828
5klLF
 236 25,4% 153 1.849E-17
6 phalp2_29493
1NtQH
 15 27,2% 165 1.849E-17
7 phalp2_19861
5zIVL
 30 22,6% 168 2.217E-16
8 phalp2_32283
34Ba
 9 23,4% 149 1.941E-15
9 phalp2_23138
4Fgaj
 4 26,3% 133 6.699E-15
10 phalp2_39364
4EoD5
 60 21,7% 147 9.128E-15

Domains

Domains
PET_M15
Protein sequence: 5lDDP
1 181
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5lDDP
Method AlphaFoldv2
Resolution 89.82
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50