Protein

Protein accession
5knce [EnVhog]
Representative
5knce (this protein)
Source
EnVhog (cluster: phalp2_20738)
Protein name
5knce
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VVIHDTGNTATAKAEANFAATRTDPQSLWTSCHAYVDTSGPLGSLSLNRQAWAAFSYANQHGLHIEMCGMNTGAPGAVPAATIAHTAALTAVLCDLAGIPKVHRSPAQVAAGASGICGHYDITRGLGVGDHDDPGPNFDWGRFVALVQAGGDNMIDYTQGAPAGALTGNPSRNVGQLLADVWSQTFDARGKIVGDLKPELDEIKALLATLAGKDAVVLTNAQVASIATTIADALVASGANGLSATDHAGVVADVKAALNTLHAG
Physico‐chemical
properties
protein length:264 AA
molecular weight:26764,6 Da
isoelectric point:5,42
hydropathy:0,11
Other Proteins in cluster: phalp2_20738
Total (incl. this protein): 6 Avg length: 280,7 Avg pI: 5,33
Protein ID Length (AA) pI
1fBuT 291 5,47186
325tC 317 5,17641
5kgc8 278 5,75776
6F1It 267 5,03084
6JbnP 267 5,11553
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21936
4OI93
 1 30,3% 211 1.130E-23
2 phalp2_18569
7cxQw
 45 32,9% 188 5.223E-23
3 phalp2_37855
4LYs8
 19 32,4% 216 3.162E-20
4 phalp2_13713
6Ajj7
 6 29,1% 185 7.426E-18
5 phalp2_17457
7PxDe
 7 30,0% 183 2.015E-13
6 phalp2_16608
eqCG
 19 26,2% 206 1.285E-11
7 phalp2_23494
6SMRG
 1 23,3% 218 1.534E-05
8 phalp2_13982
kgnW
 11 20,9% 191 2.044E-05

Domains

Domains
Ami2
Unannotated
Protein sequence: 5knce
1 264
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5knce
Method AlphaFoldv2
Resolution 77.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50