Protein

Protein accession
5k7do [EnVhog]
Representative
5k7do (this protein)
Source
EnVhog (cluster: phalp2_5832)
Protein name
5k7do
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VSDIRVTPQRWLWQPRSKPIRMIEIHATRGNTPPAKQMQAALNWVQSPNNVGGRDASGNPAWGSSFSHVIGTDGSLGTVLDDNQMPTYSAGYGGAGSTYAIDEYAISYELAQSPAQEPFSDAIYDRLVQEIAVDCKRYGIPPVMISISRQTGAVPTGIVRHDRCENGIKLGKTDPGDQFDEARFIADVKVEMEDEMDEAEVRKIAKQEAEFAVKVNRENQDGFNQHQFNLIQQASDRAVTAHEATPHGGGSEYTDEQAVKAVKDKL
Physico‐chemical
properties
protein length:266 AA
molecular weight:29234,1 Da
isoelectric point:5,04
hydropathy:-0,61
Other Proteins in cluster: phalp2_5832
Total (incl. this protein): 10 Avg length: 260,5 Avg pI: 6,57
Protein ID Length (AA) pI
1lvR2 287 9,40486
2AgDL 263 5,89815
2XUoL 256 4,58625
3WXkv 235 6,25345
3ensj 262 6,91420
3yTyJ 320 6,06628
5kaKK 234 5,25683
7jiSB 244 9,62785
iYeM 238 6,63063
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27402
4JS43
 1 74,0% 193 3.698E-71
2 phalp2_12906
2D2oQ
 1 27,6% 177 1.872E-28
3 phalp2_10807
3Y3O1
 11 24,2% 223 6.321E-22
4 phalp2_31178
7Vvn5
 47 24,6% 195 4.709E-09
5 phalp2_21916
4KsAl
 20 23,2% 181 8.441E-09
6 phalp2_33007
4igcZ
 220 27,4% 182 3.619E-08
7 phalp2_22201
6VaYI
 26 24,8% 181 6.588E-06
8 phalp2_11245
6EoH4
 30 21,5% 200 6.588E-06
9 phalp2_31152
3LHkO
 133 21,5% 204 2.079E-05

Domains

Domains
Ami2
Protein sequence: 5k7do
1 266
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5k7do
Method AlphaFoldv2
Resolution 82.14
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50