Protein

Protein accession
3VHol [EnVhog]
Representative
5Hy1d
Source
EnVhog (cluster: phalp2_20787)
Protein name
3VHol
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKICLDAGHYGNYNRCPAIPEYWESKFTWKFHLLLKAELEKYGITVITTRTEQAKDLSLTARGKKAAGCDLFLSIHSNALGNGQMVEGTDYPLACCTVTHKADVLGDKLAATVALVMGTKQNGRRINKVGSGNADWYGVLRGATSVGVPAILLEHGFHTDSRCVRWLLDDNNLSRLAKEEAATIAEHYFITKSEIKDTSVSAQIEPETAFLVKVSCSELNVRKGAGVNFPITTRIYKGYIFTIVETAYSNDGGLWGKLKSGAGWINISDKYVKRV
Physico‐chemical
properties
protein length:275 AA
molecular weight:30244,3 Da
isoelectric point:8,84
hydropathy:-0,16
Representative Protein Details
Accession
5Hy1d
Protein name
5Hy1d
Sequence length
273 AA
Molecular weight
30571,72780 Da
Isoelectric point
6,18649
Sequence
MKICLDAGHYGKYNKSPADGRYYESDMVWKLHLMLKRYLEEYGIQVITTRADQATDRALYDRGTASAGCNLFISLHSNATGSGLNNNVDYPVSYCAINGRADDIGLTLVKSVQVTMQTKQAARIEHRAGNNGDYYGVLRGASAVGTPALILEHSFHTNAAVTAWLLNDANLDRMAKAEADTIAEYYGIQKEYTLGWNHDKNGWWFANSKTAYYKSCWQIINGHKYYFNQNGYAVTDWQVIDGQDFYFEPRAGHPLECALYVSDQHGVQGPGAF
Other Proteins in cluster: phalp2_20787
Total (incl. this protein): 27 Avg length: 264,7 Avg pI: 7,59
Protein ID Length (AA) pI
5Hy1d 273 6,18649
1dnqo 297 5,65255
1gJop 224 8,72130
1n2uS 269 8,88447
3TCQO 254 8,48348
3WDwH 275 8,71614
3nXFL 246 8,84663
3o84a 240 5,36329
3ycUe 225 8,81381
4L7DE 258 9,08548
4Z7Qx 243 6,10140
4ZooB 240 6,60432
5BZMI 208 9,43509
5SxTg 314 5,62248
6Q7OT 259 7,01037
6cAkH 243 8,13812
6cdmu 318 6,46802
6n6w2 294 5,65562
75jME 277 9,15317
7aQT0 300 5,86075
7b6fu 277 9,58073
7emFu 280 8,62950
81kG 281 9,26799
EAFY 294 5,80817
NdnL 237 7,00014
n8lj 247 7,09404
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_19894
5T9s7
 90 54,4% 191 1.888E-83
2 phalp2_9278
79Kdt
 5 32,2% 192 2.750E-36
3 phalp2_39561
5UAVR
 13 33,4% 203 8.894E-31
4 phalp2_22085
5PV79
 1 32,3% 195 1.240E-26
5 phalp2_12323
7wjSB
 3 27,2% 253 1.374E-21
6 phalp2_27233
3PKbz
 18 26,9% 197 2.678E-18
7 phalp2_24413
4m1OU
 1246 26,5% 196 3.295E-16
8 phalp2_26211
jfKR
 112 29,2% 195 1.987E-15
9 phalp2_5157
238De
 36 20,3% 270 1.027E-12
10 phalp2_33525
85Tz
 32 23,8% 180 2.493E-12

Domains

Domains
Ami3
Choline_bind_3
Representative sequence (used for alignment): 5Hy1d (273 AA)
Member sequence: 3VHol (275 AA)
1 273 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520, PF19127

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5Hy1d) rather than this protein.
PDB ID
5Hy1d
Method AlphaFoldv2
Resolution 97.11
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50