Protein

Protein accession
3VGqb [EnVhog]
Representative
1NA5i
Source
EnVhog (cluster: phalp2_22618)
Protein name
3VGqb
Lysin probability
99%
PhaLP type
endolysin
Probability: 85% (predicted by ML model)
Protein sequence
MGVKEKNITICGHGSAHPSLKNLESYCTQRYNQLAKNGKHKGIIEVRRLKALTDNSRKRFVDTYHTILGRNIYSQDKRQYVYSAYKDGKYYSDCSSSGMATFKKIGYSVPLLNTAGIHSSSLFETVKVKIKNGHITNLEKLKVGDCLLFVGNDPSRPLQIGHVEYVYKIDKSKPKKHSIAMPTLRKGDKGSEVKLLQKNLNECRLFDIHGKQIPKLKVDGVFGVNTFEKLRAFQRTFTIEVDGIYGIESANKMCDVIGNS
Physico‐chemical
properties
protein length:260 AA
molecular weight:29312,5 Da
isoelectric point:9,66
hydropathy:-0,51
Representative Protein Details
Accession
1NA5i
Protein name
1NA5i
Sequence length
258 AA
Molecular weight
28901,26000 Da
Isoelectric point
9,05479
Sequence
MTDKEITICGHGSDNPSIKNLNAYSTYRYGKKASNGVRKGIVEVRRFTALDDNSRKMFHDKYKTIIGRNVYSQTLREYCYKAYNGKYYSDCSSSGMLTLREIGYTVSSLNTAGIHWSDKFETVDVKIVNGHIQNPEVLKVGDAILFAGSDPSRPLQIGHVEWVYKVPTTTTETSSSASESTCDVSLRVLKKGCKGNDVKLVQQMLISNGYDLGSYGADGDWGTKTDNAFYDWQYKNAKYVGSADRVCGKKCWAYILRK
Other Proteins in cluster: phalp2_22618
Total (incl. this protein): 16 Avg length: 274,6 Avg pI: 9,18
Protein ID Length (AA) pI
1NA5i 258 9,05479
21Fqe 269 9,76859
238s3 318 9,25948
23RH8 269 9,73004
24LLE 313 8,96995
3WC6q 257 9,44167
3iA0i 316 8,96028
40lOK 269 9,59858
411QI 266 5,31703
41pOP 269 9,63340
4JXTB 317 9,20185
4y85Z 250 9,58937
4yiV8 250 9,47571
4yrV0 259 9,53141
5jnjX 253 9,70444
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_18011
3e43j
 101 64,1% 170 1.701E-82
2 phalp2_39689
6a3H
 7 58,1% 179 3.603E-77
3 phalp2_26760
3dZRR
 6 39,0% 251 1.805E-47
4 phalp2_20441
3nWor
 16 36,9% 238 5.619E-46
5 phalp2_34071
8r4Zl
 11 28,3% 215 5.494E-14
6 phalp2_22090
5SXcA
 32 27,0% 174 1.418E-07
7 phalp2_11747
41dax
 7 23,6% 182 8.170E-06

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 1NA5i (258 AA)
Member sequence: 3VGqb (260 AA)
1 258 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1NA5i) rather than this protein.
PDB ID
1NA5i
Method AlphaFoldv2
Resolution 89.12
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50