Protein

Protein accession
3VDBH [EnVhog]
Representative
1kWHZ
Source
EnVhog (cluster: phalp2_38474)
Protein name
3VDBH
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MLGIDVSVSQKGMPWNRYAQTDVSFAFIRASQGKMPSYQRPFTDSQFQYHMRGAVALGVPFGVYHLLTARNAQEAESEAKYFLSVIEPYRKNIALWAVCDVEDEVFLPKDKASLTEVVLRFCDAVRAGGYRPMIYTNPNYLTYRLYPDRISSIPLWLAYWGASEAAAKRYDPVIWQPGKKKIFGIWTDVDYGYFTPPDVKPAPQKLKAGDRVKVLRPLIYGTQKKFTAYFPEYDVISVSGDRVVIGIGRAVTAAVEAANLEKA
Physico‐chemical
properties
protein length:263 AA
molecular weight:29691,8 Da
isoelectric point:9,20
hydropathy:-0,18
Representative Protein Details
Accession
1kWHZ
Protein name
1kWHZ
Sequence length
288 AA
Molecular weight
32250,78660 Da
Isoelectric point
5,64288
Sequence
MKGIDVAYYCGKADWKKVKAAGVDFVMIKATQGHTLGSSGLYLFTDSQFTANVNGCLQYDIPFGMYHYLTATTTSEAKEEAAYFLKRISEYKDKIKLWVSVDVEDVSPAKYCGKLSKEALTAVVRTFMACIREAGYIPMLYTNPNYLKYKYIAHAFDQEDIWLAHYGVSKPYQCPNLKIWQYGYMSVDGIGSEVDGNTGYFTLPLKEDTLVEEEVPVVPEVTLPPEPSVPEVVLPPEFNLPPAEVEVKLPPIVPGEVCSVDTNQPPKLKFKPPFFVPKGKKMNGHETK
Other Proteins in cluster: phalp2_38474
Total (incl. this protein): 2 Avg length: 275,5 Avg pI: 7,42
Protein ID Length (AA) pI
1kWHZ 288 5,64288
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24174
2ojoF
 57 48,6% 220 2.135E-58
2 phalp2_37299
88brR
 4 35,0% 200 1.553E-33
3 phalp2_22968
3mo9t
 23 34,8% 201 3.917E-33
4 phalp2_24035
8aWkT
 56 38,5% 210 1.854E-30
5 phalp2_26548
858CP
 728 37,0% 208 7.393E-29
6 phalp2_33310
6kV0o
 68 34,8% 204 1.365E-28
7 phalp2_3425
3TK4D
 923 36,8% 206 1.833E-26
8 phalp2_6199
5X5xO
 102 33,0% 206 2.110E-25
9 phalp2_34771
3k1Sy
 11 30,0% 240 9.695E-25
10 phalp2_36157
6TiaL
 25 33,1% 208 5.063E-23

Domains

Domains
GH25
Representative sequence (used for alignment): 1kWHZ (288 AA)
Member sequence: 3VDBH (263 AA)
1 288 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1kWHZ) rather than this protein.
PDB ID
1kWHZ
Method AlphaFoldv2
Resolution 79.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50