Protein

Protein accession
5dbGd [EnVhog]
Representative
5dbGd (this protein)
Source
EnVhog (cluster: phalp2_37954)
Protein name
5dbGd
Lysin probability
96%
PhaLP type
VAL
Probability: 73% (predicted by ML model)
Protein sequence
MSWATKYVGKEFASCIHLVQYVTAREFGIEKDLPDIENHAALMERRREWAQRVPPGVPLRDGLVVLMRPDSPLLHAGLLCLDTPEPTLLHTAHKPGSAVLQPMRIVRRVMKIEGIYEVLA
Physico‐chemical
properties
protein length:120 AA
molecular weight:13562,8 Da
isoelectric point:7,86
hydropathy:-0,05
Other Proteins in cluster: phalp2_37954
Total (incl. this protein): 3 Avg length: 123,0 Avg pI: 8,11
Protein ID Length (AA) pI
5dtW9 121 7,89868
5ew6V 128 8,58553
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25615
47Pcg
 285 32,5% 126 3.680E-14
2 phalp2_19425
2LxFJ
 15 27,9% 129 1.177E-12
3 phalp2_7762
75rOL
 267 30,4% 125 3.390E-10
4 phalp2_38609
25FGT
 2035 29,6% 135 1.468E-08
5 phalp2_20300
2dib8
 1 28,7% 132 2.463E-07
6 phalp2_37361
7nTsk
 49 26,2% 145 7.666E-06
7 phalp2_23063
4gLxA
 6 24,8% 133 3.644E-05
8 phalp2_23273
4Zxj6
 4 28,8% 111 4.382E-04
9 phalp2_14093
8iNl2
 704 26,9% 130 5.976E-04
10 phalp2_19713
4Ktlf
 40 29,3% 116 8.149E-04

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5dbGd
Method AlphaFoldv2
Resolution 52.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50