Protein

Protein accession
5dNm6 [EnVhog]
Representative
5dNm6 (this protein)
Source
EnVhog (cluster: phalp2_12062)
Protein name
5dNm6
Lysin probability
71%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MEILDGPALTKCNDTAIVLPWAAVTPKFDEWENPFGGSYRKWQPEDLVDLYFHEEKNWPHFQQTRKLPLCHEQPHDGKWPPEQIPQYHQLALREIFNCGSDFSFNATFTYVAGEVSRGVACILRLKNPGHFVTAVAYKEKDMLIGFKDPAPVKWLQKTEDADGNKWMGLNDFVDNVHTDITRCWRL
Physico‐chemical
properties
protein length:186 AA
molecular weight:21563,2 Da
isoelectric point:5,61
hydropathy:-0,54
Other Proteins in cluster: phalp2_12062
Total (incl. this protein): 71 Avg length: 200,6 Avg pI: 6,17
Protein ID Length (AA) pI
10Ubc 198 5,28696
16XeF 212 5,95766
1BJfc 201 5,86558
1LMug 200 5,03618
1YY12 196 5,24319
1YYf0 212 5,42428
1crTa 197 6,73368
1cs0I 197 8,28369
1fDnH 198 5,79874
1jVih 197 6,73993
1kqTB 197 7,61878
1qVgr 202 5,85018
1rkzW 194 5,76264
25EEr 206 5,75162
2A6TR 204 8,25487
2jE6K 201 5,39382
2sQnK 201 5,11638
3NZLr 203 8,71982
3Pu8j 207 6,06128
3QblP 200 5,71609
3QeuS 198 5,60463
3Qkvg 203 5,39581
3S3di 202 6,07486
3S7ZD 211 7,48958
3S7sT 166 5,72036
3eCFd 198 5,51841
3nohl 204 5,97181
3nqYm 199 6,35809
3xDe5 198 4,97321
3xGH2 202 5,96601
40teO 196 5,34448
4BMlz 217 5,87843
4CSJY 203 5,74752
4Ht3p 205 7,59803
4Ioun 212 8,17551
4JM9p 204 6,08651
4KQ9b 154 5,44400
4KoI4 217 7,53284
4LXH7 190 6,81706
4U8v4 202 5,33448
4UF73 200 6,06577
4eT4f 199 5,42962
4i0IO 198 9,08516
4i8jZ 201 5,44571
4iOcq 213 8,95442
4iRPC 203 5,48618
4ijrD 213 8,96551
4kJVv 203 4,74204
5EHZL 200 5,67983
5EvtZ 205 6,06628
5JKE 200 6,20832
5sQsS 195 5,66676
5sQvr 229 4,93149
5zLsn 190 5,17680
5zNyn 235 5,30151
6Puso 203 5,41917
6W4Ob 190 5,90133
7LeaW 189 5,17499
7MiSh 197 5,95539
7vYGk 197 6,73630
7vzCB 202 5,11013
8bCxX 190 6,28727
8nLuN 204 5,49715
Hp2a 197 6,73783
Isyw 200 5,82903
KMmm 197 7,61838
NjTO 196 5,20341
UPgO 201 5,37796
dwCY 201 5,46543
ff7M 202 8,97750
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21897
4H37N
 1 16,5% 163 6.409E-26
2 phalp2_30325
4yMf7
 8 25,3% 166 6.409E-26
3 phalp2_24476
4HhPr
 5 18,6% 177 6.233E-18
4 phalp2_34142
2jEnG
 37 19,7% 142 9.017E-10
5 phalp2_37770
4uzRK
 3 12,7% 141 7.073E-07
6 phalp2_34437
4wMwB
 66 19,8% 156 4.288E-06

Domains

Domains
Unannotated
Protein sequence: 5dNm6
1 186
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5dNm6
Method AlphaFoldv2
Resolution 88.07
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50