Protein

Protein accession
5d1Yf [EnVhog]
Representative
5d1Yf (this protein)
Source
EnVhog (cluster: phalp2_6106)
Protein name
5d1Yf
Lysin probability
76%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTNEAFPYDKVTLFEFNRSDRGEPTITAYFDKTPIATRYLRNTEHLVQFIKSFEFEDVAVRVAKTETEIIPNVPDVGVVDPELKGFKIMLDAGHSKSRSGAHGQGPVGTRPNEYECNLLQAKLLKKELEAHGAEVTLFDPDPDNLVAVGQKASGHTIALFLHHNAANADGNDEGTECHIHSAGSSLSLKLGDKIATNISNTLQCKNRGVKRSNFTVLSESINRCECCVLVESYFIDDYSNATVTKERSTKAAMAILDAILSSAPYFHPGMYV
Physico‐chemical
properties
protein length:272 AA
molecular weight:29912,4 Da
isoelectric point:5,69
hydropathy:-0,31
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36993
itwj
 7 32,7% 284 1.199E-24
2 phalp2_3504
4kB6G
 5 37,3% 190 7.835E-19
3 phalp2_33064
4B2BD
 3 30,4% 197 3.234E-16
4 phalp2_21852
4t88M
 271 29,8% 181 1.229E-07
5 phalp2_24413
4m1OU
 1246 32,4% 179 5.210E-07
6 phalp2_33525
85Tz
 32 32,5% 178 6.951E-07
7 phalp2_35303
72wI1
 17 30,0% 200 6.723E-04

Domains

Domains
Unannotated
Ami3
Protein sequence: 5d1Yf
1 272
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5d1Yf
Method AlphaFoldv2
Resolution 83.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50