Protein

Protein accession
5cojD [EnVhog]
Representative
5cojD (this protein)
Source
EnVhog (cluster: phalp2_31991)
Protein name
5cojD
Lysin probability
98%
PhaLP type
endolysin
Probability: 93% (predicted by ML model)
Protein sequence
MLDKLMKLLQAKERDNYVEKKPRDVYRGISHSTKLSKEEAAMIGGLESQHGKYEKNMGGGSASGIMQVMPNLAKMIRPGSEKRIMDRNVQQELASDIINMNEPTIKQIAAQSNKTADVVDRYALYNLGKGRGRKFLEASDDTPIEKILPAAIIKANPKLYKHKTVGDAKKAMKVALTEGGKTNEFYPDIQDLFTGMGNGEEE
Physico‐chemical
properties
protein length:202 AA
molecular weight:22431,6 Da
isoelectric point:9,17
hydropathy:-0,68
Other Proteins in cluster: phalp2_31991
Total (incl. this protein): 15 Avg length: 195,9 Avg pI: 7,81
Protein ID Length (AA) pI
1LtHd 177 6,85321
1aUSb 186 8,56754
38tBt 160 5,98028
3UL7V 205 5,31879
4FFCH 196 7,77077
4V5FI 192 9,44837
4rnUx 187 8,91148
5EkPp 184 7,77722
5bKUx 262 5,32010
5uAUo 212 8,64871
7XztX 204 5,92611
8kX6H 176 10,12129
8rpjn 212 8,65986
zM5n 183 8,62969
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23724
L6pS
 5 26,9% 141 7.334E-12
2 phalp2_29643
8s2FN
 29 22,6% 163 2.074E-10
3 phalp2_1723
2pp6N
 16 18,6% 150 3.497E-08
4 phalp2_27120
2PQih
 3 25,0% 136 1.702E-06

Domains

Domains
Unannotated
Protein sequence: 5cojD
1 202
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5cojD
Method AlphaFoldv2
Resolution 87.48
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50