Protein

Protein accession
3PKag [EnVhog]
Representative
41cyj
Source
EnVhog (cluster: phalp2_26511)
Protein name
3PKag
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSEQSIYLALVEGGMSRAAACGMLGNMQAESGLRAGNVQDGMGYSDEDYLTAVESGAVDFVRDSRGFGLCQWTYWTRKRELLAYARETGRPLDDEAMQVEFCLKELREDHPALWAYLQTATGVYEAAKRICLEYERPAVNNVEKRAQYANEWFMRLAGLEAEPVPEAGAPEAEPESDFWPPRTLSVGMYGVDVVALQGLLIARGYPAGITGTFDAGTGAQLRAFQRRHGLKDDGICGPLTWAKLVEGAA
Physico‐chemical
properties
protein length:249 AA
molecular weight:27316,5 Da
isoelectric point:4,74
hydropathy:-0,28
Representative Protein Details
Accession
41cyj
Protein name
41cyj
Sequence length
275 AA
Molecular weight
29933,32500 Da
Isoelectric point
4,96923
Sequence
MTGQEDKALYIGKRCIEAGMTIAGAAGVLANIADESAFKSTNVEDSKENRLGMNDAQYTTAVDSGRYAGFIGDEAGYGLCQWTAKDRKAGMLDFHRKRGVSIGDFKTQVEWMLTEIRGYSKAWEKVKSSASPYDCGYYVCKYYEIPTNTEATAESRGGSALGWFGFLTQALDAGAESTISTTPASPDPEPQELDEDGVPVPKTWPPRMIDEHCSAWPEVKLLQAALACRGYSVTVDGLWSKSLTEKVKAFQSSHNLTPVDGVVGPMTWACILYLS
Other Proteins in cluster: phalp2_26511
Total (incl. this protein): 11 Avg length: 264,6 Avg pI: 5,05
Protein ID Length (AA) pI
41cyj 275 4,96923
1GJWv 253 5,83176
1GiXN 250 4,88363
1GuOc 261 5,03079
1cMRS 272 5,12269
2Vkyu 272 5,03522
2ouUU 280 4,72039
3PLLL 265 5,18056
3nE7n 259 5,03601
4L7jP 275 4,97935
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16800
1gzPH
 189 33,8% 257 4.760E-67
2 phalp2_26837
3WBQS
 10 29,6% 277 5.509E-46
3 phalp2_38855
1JedZ
 48 28,1% 174 3.832E-27
4 phalp2_9130
5YT38
 2 29,2% 181 3.282E-26
5 phalp2_37502
3dOQI
 2 23,8% 197 5.967E-24
6 phalp2_31124
24oqz
 1 33,7% 169 2.024E-23
7 phalp2_4603
4gqz6
 10 22,0% 168 4.356E-13
8 phalp2_17643
6M3yO
 1 24,8% 185 7.873E-13

Domains

Domains
Phage_lys2
PG_1
Representative sequence (used for alignment): 41cyj (275 AA)
Member sequence: 3PKag (249 AA)
1 275 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (41cyj) rather than this protein.
PDB ID
41cyj
Method AlphaFoldv2
Resolution 88.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50