Protein

Protein accession
3PGVU [EnVhog]
Representative
7DPnE
Source
EnVhog (cluster: phalp2_40594)
Protein name
3PGVU
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MLIGSSNEEKIWNFLRSKGLNNYGVSGLMGNLLAESGLKPNNLQDTGNVKLGMTDDEYTRAVDNGAYTKEQFIHDGFGYSLPQWTWHKRKKNYYEYAKSKNKSIGDLETSLEYLYKELTEGYPSVLNTLKTATSVLEASNAVLLKFECPADQSISMQNKRASYGQSYYNKYAKNGNTESEKIVGVKTYQENNRIQLSKNFNSYEFRCGLGSPCSCSTILIDSKLVEYLQKIRDHFGKSITITSAYRCPSYNKRIGGATGSYHSKGMAADIVVSGVAPREVAKYAESIGILGIGLYESSADGYFVHIDTRTTKSFWYGQAQAYRSTFGASSVSSSTTTTTTTTTNTTSSSDDTIYTVKSGDTLYKIATKYGITYQTLAKYNNISNPSKIGVGQKIKIPSNASGGTKIKVTANLLNVRAGAGTNFKIVATIKKDSTHKLLEEKDGWGRISGGWISAAYYKKI
Physico‐chemical
properties
protein length:460 AA
molecular weight:50668,3 Da
isoelectric point:9,34
hydropathy:-0,51
Representative Protein Details
Accession
7DPnE
Protein name
7DPnE
Sequence length
506 AA
Molecular weight
56197,30540 Da
Isoelectric point
5,00180
Sequence
MDGNEEKIWRWLWEQLGNSYGAAGLMGNLQAESGLNPRNLQNSYEGSLGMNDRQYTEAVDSGAYTKDQFVQDRAGYGLAQWTYSTRKAKLYEYAKMEEKSIGDLETQLEFLMVEMAKDYRGVFTALLEAKSVREASDAVMLKYERPADTSEKNRERRAALGQKYFDRYAAEAGAGEAGADGAGESIGEEESPPEGRETANTGVMMNGKAKNCVDLAEEKLGDPYVFGAWGDPCTVRIRKQYAGYNPAYKEKIYGACAVLNGDEPECMFCKWYGHLCYDCRGFTHYVLKSAAGIDIQGAGATSQYDAGGNWEEKGNIEKMPNAVCCVFKYRDGKMSHTGLHIGDGMIIHCSTVVKRGAISDTTWTHYAVPKGLYTAEELKEAGRVKMRATLRSGSGGDAVRELQEILKEMGFDPGIVDGKFGQKTREAVMAFQAAFGLTADGIVGGVTWSEIEKQQNLRRPRQPEEQEKEPQEEPEQEPEEEEKTVAMPEGMMREIYEYLKGKLGGE
Other Proteins in cluster: phalp2_40594
Total (incl. this protein): 7 Avg length: 472,9 Avg pI: 7,77
Protein ID Length (AA) pI
7DPnE 506 5,00180
1FIN9 480 8,81910
2lFy8 477 8,77268
3TIeq 440 5,45668
3gjjC 501 8,56728
6tNR8 446 8,44679
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34295
3nyql
 2 30,2% 344 2.253E-81
2 phalp2_37779
4y6Ge
 6 32,8% 444 4.711E-63
3 phalp2_21233
1gBO4
 3 27,8% 477 6.399E-63
4 phalp2_2108
3dVmz
 7 30,8% 505 3.827E-58
5 phalp2_803
3ulFn
 191 26,0% 525 2.466E-52
6 phalp2_33155
7DNa6
 2 28,1% 461 4.521E-52
7 phalp2_22696
7Vmwp
 2 23,8% 516 2.370E-30

Domains

Domains
Phage_lys2
Unannotated
PG_1
Representative sequence (used for alignment): 7DPnE (506 AA)
Member sequence: 3PGVU (460 AA)
1 506 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3PGVU
Method AlphaFoldv2
Resolution 85.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7DPnE) rather than this protein.
PDB ID
7DPnE
Method AlphaFoldv2
Resolution 82.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50