Protein

Protein accession
3PDs1 [EnVhog]
Representative
3PyrV
Source
EnVhog (cluster: phalp2_26813)
Protein name
3PDs1
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDKITMVKNWLLSRVGNPYLMGGTGQPCTVSYRKARAAQYPGSAAKIKANCPRMQGKAGTCDGCRYYDESNKSGKRAYDCAQLTRWAMDAVGISLVSGATSQWNKTKWAEKGSLDTLPVHRLCLLYRQDYPGKMGHAGVYMGDGTCIHAKGHNEGVVQESIECYGRWTHWAIPEGLYVSCVSSPSAVAQALSLMTEAVAFLQQAVEEEKNAAL
Physico‐chemical
properties
protein length:213 AA
molecular weight:23252,3 Da
isoelectric point:8,81
hydropathy:-0,34
Representative Protein Details
Accession
3PyrV
Protein name
3PyrV
Sequence length
147 AA
Molecular weight
16625,93340 Da
Isoelectric point
8,33668
Sequence
MAELGYTYLEILQFYYPGTEIGLLNEDGSVKLMDKASIVKEWALSKKDCGYVWGATGYTLTQSKLNELINQYPQYVSQSKNGKWIGKQVFDCASFVRFALKEINISMVSGASSQWKKTNWEVKGTIDTLPKDKVCILYREAPTANPM
Other Proteins in cluster: phalp2_26813
Total (incl. this protein): 4 Avg length: 200,0 Avg pI: 8,87
Protein ID Length (AA) pI
3PyrV 147 8,33668
1GiOv 197 9,28952
6ajSa 243 9,04416
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20494
3ZWZ1
 10 34,1% 120 1.102E-17
2 phalp2_8923
3fIyb
 7 29,2% 106 6.485E-16
3 phalp2_18961
41f0i
 3 27,4% 113 2.201E-12

Domains

Domains
Disordered region
Unannotated
Representative sequence (used for alignment): 3PyrV (147 AA)
Member sequence: 3PDs1 (213 AA)
1 147 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3PyrV) rather than this protein.
PDB ID
3PyrV
Method AlphaFoldv2
Resolution 85.98
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50