Protein

Protein accession
5SdMy [EnVhog]
Representative
5SdMy (this protein)
Source
EnVhog (cluster: phalp2_14665)
Protein name
5SdMy
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MSIKIGQASLGETGGRNQQPGNQTGRELNFSTWYPAVWLGVLRFKDPAKAELAAKACEAGVKNKNIGYDMDNRNTAYAAAKAVGWDLSKITKPVETDCSAFMMLCAIS
Physico‐chemical
properties
protein length:108 AA
molecular weight:11660,2 Da
isoelectric point:8,84
hydropathy:-0,30
Other Proteins in cluster: phalp2_14665
Total (incl. this protein): 14 Avg length: 124,9 Avg pI: 8,38
Protein ID Length (AA) pI
13CQP 140 9,60761
1cw17 115 7,63907
1nqan 135 9,11552
24mfV 157 8,05831
3ZRfS 203 5,27121
3v6NE 126 8,69190
3ysI6 169 5,70308
409tY 100 9,09754
5Ue8f 80 9,42420
6omCT 85 7,90880
6rrUE 85 10,28562
NsVK 88 9,46630
xBqE 157 8,22812
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17024
8fzIh
 11 51,8% 106 1.447E-41
2 phalp2_18825
1mmxR
 11 27,1% 103 9.929E-27
3 phalp2_36663
41hf6
 11 37,3% 91 4.829E-26
4 phalp2_8082
6g5Nk
 31 33,0% 109 2.151E-24
5 phalp2_18028
3kSSg
 2 29,2% 106 2.266E-21
6 phalp2_34838
3VECK
 1 34,5% 107 3.109E-21
7 phalp2_22116
6hgOh
 1 37,1% 70 1.456E-16
8 phalp2_7623
5R8MY
 8 32,4% 77 1.456E-16

Domains

Domains
Unannotated
Protein sequence: 5SdMy
1 108
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5SdMy
Method AlphaFoldv2
Resolution 96.05
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50