Protein

Protein accession
5RDQF [EnVhog]
Representative
5RDQF (this protein)
Source
EnVhog (cluster: phalp2_32076)
Protein name
5RDQF
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MASYNIHGGHNPKGKIACGAVGLLDESEQDRIIKNKVISILRANGHTVYDCTEDNGTSQSDVLKKIVAKCNVHKVDLDVSIHFNSGANDTNGNGTTTGSEVWIYKNSSSSKTAAQRIVNNLASVGFKNRGIKTSTGLYVLRKTKSPALLVEVCFVDDKDDYNLYINNVDRIAKAIADGIVGATLSSGNNAPSTPNPTPTTTNQLYRVRKSWSDVKSQTGAYKDISNAKRECPNGYSVFDSNGNVVYTNGTIQATNTAPTVTAKPSAPASSSSTTSKYYLANARVRGWQSAMNKGFDLKGNNKLVVDGKFGEASQSCASSHNLWSGQKHNCPTAIKWLRKTLHDTYRFTKLPITGKWDAYLTTCVKVFQKNRGLTQDGRVGLVTTYYLLKG
Physico‐chemical
properties
protein length:390 AA
molecular weight:42313,0 Da
isoelectric point:9,53
hydropathy:-0,49
Other Proteins in cluster: phalp2_32076
Total (incl. this protein): 9 Avg length: 286,8 Avg pI: 9,30
Protein ID Length (AA) pI
3pgDb 390 9,57376
8tqtK 389 9,39538
A0A0A8WIP6 271 8,95667
A0A2R2ZGL3 271 8,95661
A0A2R2ZH38 271 8,95661
A0A8S5N5R1 185 9,43258
A0A8S5RG13 189 9,65648
A0A8S5TWM7 225 9,23827
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30607
6ndmR
 8 37,4% 270 1.631E-47
2 phalp2_11988
35NoL
 2 37,5% 245 1.130E-39
3 phalp2_21446
82r2O
 3 32,5% 249 2.670E-25
4 phalp2_263
6tFdA
 76 26,8% 380 6.419E-16
5 phalp2_11834
8nufL
 33 29,7% 252 2.666E-14
6 phalp2_4252
7Y66x
 61 26,2% 274 1.479E-13

Domains

Domains
Ami3
Unannotated
PG_1
Protein sequence: 5RDQF
1 390
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5RDQF
Method AlphaFoldv2
Resolution 86.11
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50