Protein

Protein accession
5Jdk1 [EnVhog]
Representative
5Jdk1 (this protein)
Source
EnVhog (cluster: phalp2_14656)
Protein name
5Jdk1
Lysin probability
72%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MAATGLPLPKVGEVVNQPIQVIDGDRLSAARSWASIAATGAELAKVGYDDLKYQMHQIQVGEYSRMDVEDTRKITELRDKNHHDPEGFDRDANAYRDGVLANTPAWAINHRRAKLGSLSNSSYAGILGEKRTQDLRLAKDNWTADVDMASREVSAAAMTGPMDSPAGLVAMENYRNKIAAGVTSSFISQREAERLILNTADSSIAQGVVRETKEIYTSARANQESGYLAALKHAEENILRNPRFKGLTEQERYAYYSRATSEVRALEAERKQDLGLARQAKVGMEFAMNSGLLPEPSALDSLVKQLNGAGGHAEAAALLANYERQKVLMPFGQQPLSQMLRQRQDYGVSSGATAPPQVRGFVDEAAGATGVPASYLYRTLGRESRFNPYAQSPTSTAGGMGQFIDSTWNEMISKHGAKYGLAPGTPKTDPRASILMTAEYAKENAARLEASGLPVNDQTLYVMHFAGPGGTLLLRADPSSQASTLLPKAAAANRTIFYNKDGSPRTVGEVVAQLGSQHGGGGAAGGGFVPRPTYAPGVDPRLAVGMNKQIATKAWEEWKLLDAQFKPDGSRPSQQHVELVQMAAAESGDHRLLQTIADKLGQYQVATELGQQPVGQQQAVHTELGRRAAAGELTPNEDKVLQTLDQKIALTTKNIVNDENPIDHTVKAWSNRGTFQTPPPLNPGKDGFREALAYRAQIAQFARESYQTGPLSALDKPDVAAINAFLGSTADPRLKARMFSDLVAAIPDEQMRNKTLAKLGQESPEAMVSAFAGGMYSVNPDLAASILRGQGIIKVDPRKDPAAKDQAGGKTEYADALDKVMPQDAFAVEMRSTLSGAYATMRSATTARYADLTPPGETKFSEARLQQAANEVTGGFVKHNGGSILAPERGMTQARFDGVMWALTDDDLRGAMTLSGTPLTVDYLRSSASLESRSDGTYYVRMNSNAMSPEYAMVAVGEFAAPSNFVLDLRGRKPGAANVLYSEVPFYTP
Physico‐chemical
properties
protein length:989 AA
molecular weight:106563,5 Da
isoelectric point:6,35
hydropathy:-0,43
Other Proteins in cluster: phalp2_14656
Total (incl. this protein): 26 Avg length: 976,9 Avg pI: 5,63
Protein ID Length (AA) pI
16hVO 1003 5,84245
1dcCq 816 5,92424
1lRJt 1087 5,09285
1oyoE 955 5,98443
2SasO 784 5,94248
4F2Hu 1017 5,33203
4I4MM 1011 5,17612
4JsTK 1011 5,21989
4Lqoy 959 6,24134
4MISH 1008 5,94925
4RmXK 1089 5,61049
4T4Pm 979 5,66596
4Xxbj 950 5,85450
4dAVS 1021 5,24962
5DRFC 1099 5,22131
6HTSh 983 5,63135
6HV56 681 5,83239
6I1HO 1010 5,42979
6I1yr 976 5,32174
6IayZ 1022 5,45293
6Ig9N 960 5,78288
6XXBg 971 5,52841
6Y2oo 971 5,28497
QT2v 948 6,05161
hAUB 1099 5,53961
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23455
6HWZA
 3 24,6% 645 4.460E-177
2 phalp2_39652
6PvRb
 9 27,6% 845 3.261E-81
3 phalp2_12645
1NTfo
 7 23,5% 934 3.866E-63
4 phalp2_2734
7rNWe
 28 21,6% 1070 7.126E-56
5 phalp2_12229
6RVBN
 7 20,1% 946 2.221E-50
6 phalp2_3986
7yjZk
 1 22,0% 880 2.409E-36
7 phalp2_4719
4QmRE
 2 20,2% 929 9.640E-36
8 phalp2_3002
1DOh9
 2 17,9% 668 4.833E-25

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5Jdk1
Method AlphaFoldv2
Resolution 82.91
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50