Protein

Protein accession
5Dm5y [EnVhog]
Representative
5Dm5y (this protein)
Source
EnVhog (cluster: phalp2_184)
Protein name
5Dm5y
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNRTVAFVRAKFSAKRTKPVKWIVLHSMEAAATTSAAEALGRYFARLTGRVASAHYGVDLDSTVQYVEDDRIAYHAAGLNAESIGIEQAGTAHFSAADWAAVSDMIDNQTVPLVAYLADRYGIPYRFVDASAINAGVSGITTHAEVSRAKRKSTHWDPGPNYPTHYVIMKAAELRKAVPTPAVVPPDQTAQVLKFIAAVLDDIRRRPVRRGEKSPRVSVVQTILRNKFGYPIKVDGVFGPQTENFVKWFQGSHGLVVDGVVGAKTVDALAR
Physico‐chemical
properties
protein length:271 AA
molecular weight:29531,3 Da
isoelectric point:9,69
hydropathy:-0,12
Other Proteins in cluster: phalp2_184
Total (incl. this protein): 192 Avg length: 277,4 Avg pI: 7,95
Protein ID Length (AA) pI
14mWx 274 6,43465
15SfC 277 6,22645
18Myu 269 5,12406
19UYx 275 8,61061
1el6u 245 7,28042
1h7vZ 274 7,07898
1iX3b 281 8,42552
1jJdu 324 9,00038
1jStf 269 8,40566
1jYnp 243 5,75179
1opbC 221 9,89417
28Kuj 285 8,35473
2Vwaj 285 8,76720
2ZDBG 273 5,22205
2ZG11 275 4,97662
2cew9 284 8,75153
2d24i 274 6,69867
30TFF 274 6,28886
310IQ 267 5,16322
3152I 207 4,89704
317XR 252 5,75008
36NzQ 274 6,43891
3OIva 252 7,28087
3QzzH 304 5,62140
3lvgd 283 7,73189
45CcQ 286 8,70260
46LbB 267 5,46759
475f6 268 5,05596
47DKC 274 6,22685
47FQw 274 6,49206
47HMp 275 5,86314
47dek 274 6,58044
47nZC 267 5,03027
485Mk 274 6,43755
49ODN 274 8,83128
49RXR 274 8,87151
49ePe 274 8,60951
4Nenv 243 5,80630
4aSbW 274 8,64187
4alGA 267 5,40609
4b9ic 274 8,24907
4bEKr 268 4,88272
4eGri 264 8,88479
4gs2o 285 6,76460
4jk0F 303 6,15398
508lu 280 6,30074
51QAv 285 9,08522
5SPAa 282 8,69751
5TW6h 281 9,01560
5sJp 285 8,61538
5sVa 284 8,72304
5sWl 284 8,78893
5sYM 286 8,75914
5t2S3 294 6,66672
5t4r 285 8,69564
5tea 288 8,60268
5tu5 224 7,88411
5yaVK 260 8,88466
6CKcS 248 5,53358
6K80d 266 6,01120
6S8FA 306 5,02908
6U9Uy 267 6,26391
6YX6I 274 8,61183
6n78 286 8,89395
75ZnV 282 8,87248
7AgKh 285 8,54182
7AgLK 285 8,55355
7AmFH 284 8,53557
7C71I 287 8,90974
7G3Z2 285 9,09670
7MCjf 285 8,39915
7MFRP 288 8,40573
7Mag6 284 8,59520
7NBR2 285 8,12277
7NlaR 296 8,30548
7O3Fq 245 7,15128
7OLM1 286 8,55523
7OVPJ 284 8,74754
7Ood0 290 8,68281
7OtlI 284 8,98085
7OyBG 287 8,59520
7PhPm 271 8,61551
7PhQF 286 8,58856
7PhRk 288 8,11394
7Q7A0 284 8,90968
7Q7Do 284 8,57534
7Q7I3 271 8,60165
7Q7IJ 285 8,88208
7Q7KH 285 8,71137
7Q7ML 285 8,69100
7Q7No 244 7,15707
7Q7O3 284 8,35982
7Q7To 297 8,49340
7Q7UI 286 8,77158
7Q7sB 288 8,60242
7Q7tg 285 8,55362
7Q7uD 288 8,11833
7Q7w0 285 8,89111
7Q7xZ 271 8,60848
7Q7xj 286 8,87338
7Q7yD 286 8,70447
7XLMJ 267 5,65687
7aSgf 287 8,90052
7aSjU 284 8,76327
7b43y 284 8,74780
7b452 299 8,34087
7brKn 282 8,42810
7jB99 286 8,69132
7jBbi 287 8,88234
7jBjY 285 8,35376
7jCPR 285 8,69770
7jJCi 288 8,60242
7jM8t 285 8,76340
7jOrR 285 8,34384
7jOsA 287 8,60242
7jOuL 286 8,87325
7kprl 285 8,59513
7mFvw 281 8,77719
7s9hr 267 8,46504
7spPL 269 8,76069
7uBqk 262 9,06234
7uPI6 257 7,23949
7uT5e 281 8,44222
7v76H 283 8,82058
7wViR 263 8,22883
7ynMz 262 9,09683
84d3e 285 7,08591
859FL 212 7,25097
8GYpA 284 8,90993
8GYpB 285 8,57534
8GYpO 284 8,53557
8GYpQ 287 8,40012
8GYpR 296 8,34964
8GYpS 287 8,88234
8GYpT 268 8,60107
8GYpW 244 6,44363
8GYpX 285 8,70447
8GYpY 286 8,07391
8GYpZ 285 8,75495
8GYpu 284 8,75482
8GYpw 286 8,39264
8GYpx 285 8,74722
8GYq5 269 8,40315
8GYqC 285 8,54717
8GYqD 286 8,54130
8GYqa 268 8,34680
8GYqb 284 8,54175
8GYql 284 8,53557
8GYqn 287 8,11833
8GYqp 284 8,74734
8GYqr 286 8,38703
8GYqs 285 8,88221
8GYqt 285 8,58817
8GYqu 245 7,66954
8GYqz 284 8,89098
8M3jX 287 8,89130
8M3lr 284 8,71144
8M3mV 284 8,75502
8M3sV 297 8,33984
8M3v6 287 8,69764
8MbCW 288 8,39999
8Mbmf 286 8,53557
8Mbtt 284 8,69100
8Mbx5 289 8,53557
8MbxO 292 8,04625
8Mbzi 289 8,04354
8N0dU 287 8,73271
8N0dc 286 8,07262
8N0fl 284 8,59513
8N0g4 286 8,54195
8N0if 284 8,55362
8N0jH 285 8,87325
8N0lb 284 8,70447
8i5Td 274 4,73784
8mXs5 275 6,58579
8myxu 265 5,07802
D3io 282 8,95719
SgA1 267 5,12383
Ur6R 217 6,40720
ZNtH 267 4,81616
b6pl 285 8,40637
dg0k 286 8,56064
ftZp 288 8,75979
pLk9 244 7,28798
wyJq 282 8,69712
wyLu 271 8,41772
x15Y 285 8,76739
xzt5 285 8,60835
ym3z 228 7,26012
ym42 287 8,89401
zg9u 245 6,91545
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_22201
6VaYI
 26 37,8% 267 1.960E-72
2 phalp2_24741
6EXtT
 52 33,8% 281 1.161E-70
3 phalp2_35315
7b5mp
 11 31,5% 168 3.992E-61
4 phalp2_16822
1p2ki
 32 35,5% 169 1.883E-57
5 phalp2_11245
6EoH4
 30 46,5% 172 3.522E-57
6 phalp2_3964
7rht2
 43 36,8% 258 3.761E-52
7 phalp2_18351
5t09q
 43 39,4% 175 2.992E-50
8 phalp2_33007
4igcZ
 220 37,7% 172 4.090E-50
9 phalp2_18897
1XqTn
 3 37,8% 169 2.666E-49
10 phalp2_7739
6UXdw
 5 27,9% 179 3.769E-44

Domains

Domains
Ami2
PG_1
Protein sequence: 5Dm5y
1 271
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5Dm5y
Method AlphaFoldv2
Resolution 94.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50