Protein

Protein accession
5DkBI [EnVhog]
Representative
5DkBI (this protein)
Source
EnVhog (cluster: phalp2_23354)
Protein name
5DkBI
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MVTDNRILQELRYLNIKYVDYKNPTQPKWFRAPYFPQNIKHIMLHTTASWSDCQYKHITPEFFLNYFFNQLKWGKPGYKFMIFCDGQVYQFGPLNKDEVLLWEEVTYGASGGYNGNTIHISWVGGYNPRDPMGGILNINRVQADTMFELAKALLTLFPKAVLMGHNQVKVDHKPCPLFSVPKEAIRRGISKDRILFDDPLGYVRKLPDLSGLYNKDILA
Physico‐chemical
properties
protein length:219 AA
molecular weight:25430,1 Da
isoelectric point:9,10
hydropathy:-0,33
Other Proteins in cluster: phalp2_23354
Total (incl. this protein): 3 Avg length: 220,7 Avg pI: 8,91
Protein ID Length (AA) pI
4KLaj 178 8,92721
5DkpV 265 8,69635
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_18379
5Eq5Q
 10 32,5% 175 1.715E-29
2 phalp2_14613
5sQyS
 2 26,5% 173 1.174E-17
3 phalp2_11611
1k5JO
 2203 30,1% 156 4.005E-17
4 phalp2_27876
8EUCV
 18 28,3% 155 1.854E-16
5 phalp2_7758
71AR5
 15 29,1% 158 1.162E-15
6 phalp2_26819
3QMwQ
 3 30,0% 143 1.126E-13
7 phalp2_11894
2jrH4
 329 29,2% 147 6.959E-13
8 phalp2_36193
72BPm
 409 24,4% 147 7.163E-10
9 phalp2_2237
4n15b
 512 26,2% 156 1.304E-09
10 phalp2_28171
8yYQh
 287 24,1% 149 2.373E-09

Domains

Domains
Ami2
Protein sequence: 5DkBI
1 219
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5DkBI
Method AlphaFoldv2
Resolution 89.64
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50