Protein

Protein accession
3GtcC [EnVhog]
Representative
5p5Sv
Source
EnVhog (cluster: phalp2_8011)
Protein name
3GtcC
Lysin probability
73%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MSIKMEAASLNEIKEMVKRHEGYRLEPYKCTMNKLTGGYGHVILPGEEVPTTKESFLVQPN
Physico‐chemical
properties
protein length:61 AA
molecular weight:6925,0 Da
isoelectric point:6,72
hydropathy:-0,53
Representative Protein Details
Accession
5p5Sv
Protein name
5p5Sv
Sequence length
49 AA
Molecular weight
5616,14280 Da
Isoelectric point
5,08239
Sequence
MSYEDLSKSVKLSEGFRNKIYQDTEGFDTIGWGHKVVPADNFVANKEYT
Other Proteins in cluster: phalp2_8011
Total (incl. this protein): 61 Avg length: 67,5 Avg pI: 5,07
Protein ID Length (AA) pI
5p5Sv 49 5,08239
1EKzr 78 4,58090
1WNfr 65 4,82264
1tmmM 73 4,16621
1ut73 50 4,87351
28ghp 75 4,48047
29y48 67 4,71004
2BNri 59 5,87894
2BWty 85 6,05525
2K3r9 104 5,15100
2L5Q2 67 5,71325
2M2fQ 70 5,03942
2MkrU 59 4,29398
2jQz8 68 6,72834
2rsUV 53 5,52233
2ujtS 94 5,10524
2vJCc 110 4,94365
2y17u 47 4,83736
32zWw 72 6,04252
35WMs 52 5,52892
3AIx6 70 5,06091
3AL26 55 4,47797
3CCwF 62 9,16697
3Daze 42 4,64729
3DjvF 76 4,70220
3GmiG 66 4,88226
3HJMw 70 4,54504
3IOOX 65 4,77887
3JA3m 61 5,06881
3JylA 77 4,55982
3KZzY 66 4,41954
3YZQH 52 4,05003
3jojI 47 4,65292
3oimb 76 4,52634
3xdjs 57 6,06213
4Pdrb 40 4,59796
4R89l 78 5,24990
4Saow 69 4,34144
4Swo5 76 5,75037
4sC2i 58 4,39118
4tFOK 79 4,58090
4tmOi 84 4,66923
5dT3h 90 4,70038
5oB5j 74 4,49036
5pVdO 56 4,48252
5qAom 41 5,04585
5r26B 51 4,86214
5rbDs 47 4,50167
5s5m5 64 5,30657
6Mr1k 54 4,62484
8GslP 91 4,59750
8d1pG 110 5,34158
8t6pT 62 4,78206
8zVhs 68 4,74949
9LDa 75 5,75202
E7gn 85 4,67219
Tpyn 70 4,99833
Y6qc 69 4,99833
hNyH 51 6,71475
yMY9 74 5,26002
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36361
qPUC
 7 96,9% 33 1.043E-10
2 phalp2_17137
2My4b
 1 42,4% 33 3.742E-10
3 phalp2_9168
6BhBW
 11 52,5% 40 9.756E-10
4 phalp2_19533
3D0NM
 8 40,0% 35 2.545E-09
5 phalp2_11447
8Gwah
 23 52,9% 34 4.823E-09
6 phalp2_23646
8DLFL
 27 35,8% 39 6.640E-09
7 phalp2_3621
4PHRe
 1 36,0% 50 1.259E-08
8 phalp2_2480
5A8IK
 119 39,4% 38 1.628E-07
9 phalp2_34633
5qj3r
 1 43,7% 32 1.113E-06
10 phalp2_22294
2r1l
 3 39,4% 38 2.112E-06

Domains

Domains
Unannotated
Representative sequence (used for alignment): 5p5Sv (49 AA)
Member sequence: 3GtcC (61 AA)
1 49 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3GtcC
Method AlphaFoldv2
Resolution 72.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5p5Sv) rather than this protein.
PDB ID
5p5Sv
Method AlphaFoldv2
Resolution 84.34
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50