Protein

Protein accession
3DpXp [EnVhog]
Representative
87KcW
Source
EnVhog (cluster: phalp2_10521)
Protein name
3DpXp
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDKREITDTIVIHCTQTPPNMDVDVAKVTEWHTQRGFDTIGYHYLIKRDGTLQVGRDEDVVXXXX
Physico‐chemical
properties
protein length:65 AA
molecular weight: Da
isoelectric point:5,06
hydropathy:
Representative Protein Details
Accession
87KcW
Protein name
87KcW
Sequence length
77 AA
Molecular weight
8847,94400 Da
Isoelectric point
5,65488
Sequence
MKDAIIIHCSATRAEQDITAADIESWHRARGFWTIGYHYVIRLDGTIEPGRDVTLDGAHCMGWILFNPIYVSCYYNQ
Other Proteins in cluster: phalp2_10521
Total (incl. this protein): 27 Avg length: 85,7 Avg pI: 7,71
Protein ID Length (AA) pI
87KcW 77 5,65488
10RJ5 46 10,36428
12tW8 96 5,71677
17B6C 73 8,95835
1Vwd7 81 9,03126
1zRP5 88 8,97550
2UJLs 76 9,06363
2ahFf 99 6,06332
2fHlE 90 5,32413
3G2bG 84 6,38969
3KWu6 137 5,94902
3ZfPY 79 6,01598
3v69J 79 7,76082
48z4F 50 9,35850
6BhA8 86 9,75163
6OsO9 58 7,95155
7KnAO 78 7,92518
8EuwO 60 9,51935
8GAXd 65 7,78715
8tUOC 94 7,96747
8tqUJ 86 6,14608
Hdm4 68 9,13731
RtiE 137 5,95533
cCzf 88 8,98639
nET0 76 9,09773
A0A8S5T8Y8 198 8,18209
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27898
ipdG
 164 67,2% 61 7.265E-33
2 phalp2_21606
2vySa
 303 50,8% 59 2.497E-24
3 phalp2_9904
2GCXD
 1 52,5% 59 2.684E-21
4 phalp2_4275
7YpR0
 5 44,2% 52 2.474E-16
5 phalp2_25923
64Nde
 24 42,3% 59 2.287E-15
6 phalp2_14978
yv9W
 17 48,2% 56 5.934E-15
7 phalp2_9314
7uSZF
 4 39,7% 73 5.084E-13
8 phalp2_26108
2kvR
 27 37,0% 54 9.603E-13
9 phalp2_37043
NDSw
 22 32,8% 73 1.134E-10
10 phalp2_25454
2YvBT
 2 44,0% 50 6.603E-08

Domains

Domains
Unannotated
Representative sequence (used for alignment): 87KcW (77 AA)
Member sequence: 3DpXp (65 AA)
1 77 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3DpXp
Method AlphaFoldv2
Resolution 83.00
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (87KcW) rather than this protein.
PDB ID
87KcW
Method AlphaFoldv2
Resolution 79.98
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50