Protein

Protein accession
3Dali [EnVhog]
Representative
pkYK
Source
EnVhog (cluster: phalp2_9437)
Protein name
3Dali
Lysin probability
98%
PhaLP type
endolysin
Probability: 57% (predicted by ML model)
Protein sequence
MSSNVNAETDKMLLYSDSFLNYMKKAENDKLFTYGTEMIHESPEGGNNTIGYGHKLTDEEVKDNKVYGYDLDTLTRQQANDILLRDLEEKNKLLTNKLGVEYTNLDPKRKQMLLDIEFNVGDAPGVFPNFTEGVLQNKIDVMKKEYKRKFTDREGKTQPLTKRNELFSNFFFSKN
Physico‐chemical
properties
protein length:175 AA
molecular weight:20315,7 Da
isoelectric point:5,54
hydropathy:-0,87
Representative Protein Details
Accession
pkYK
Protein name
pkYK
Sequence length
133 AA
Molecular weight
15763,54670 Da
Isoelectric point
5,95016
Sequence
EGGTDTIGFGHKLTAQEIKDNKVYGYSLDKLTPEIAKKILMKDLNQTEKTLTNNYGEKYINLDDRKKQMLMDFQFNVRNFSDAATFKNFKKALFADDEEGMKEEYERYFKDKEGTWQTLARNKDFFNYFFVDK
Other Proteins in cluster: phalp2_9437
Total (incl. this protein): 27 Avg length: 175,8 Avg pI: 6,64
Protein ID Length (AA) pI
pkYK 133 5,95016
1rZ4f 176 5,39478
1tDPU 176 5,80789
3FcKX 176 5,39478
3HIxw 179 5,96385
3HtTH 176 5,54495
4r1TR 159 4,29506
4wme 172 8,89478
5pHX3 177 9,15511
5pZsU 180 7,83492
5qBTb 177 9,01579
5rQKP 177 5,56825
7W4c1 175 5,08825
80Wsk 175 7,76883
81cuB 180 6,64541
83Rof 176 8,61286
8bw2l 175 5,36477
8eda6 177 5,57093
8fV4y 204 9,17045
8hEE3 176 5,23177
8ig5J 175 8,59662
8jVpK 183 6,21423
8nMXl 177 6,17638
8vEgs 176 5,22387
8vhI4 180 8,94101
8vuB4 184 6,33393
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27983
XBT4
 216 38,3% 133 3.408E-31
2 phalp2_5754
7CnSo
 13 51,7% 87 4.672E-31
3 phalp2_20082
1M8nQ
 16 29,2% 140 3.529E-15
4 phalp2_40086
7UWnF
 13 26,3% 129 2.575E-12
5 phalp2_35544
YW2Y
 3 25,8% 155 2.309E-11
6 phalp2_38422
17tKX
 93 30,9% 142 2.309E-11
7 phalp2_26755
3bK6u
 2 29,3% 126 3.438E-09
8 phalp2_33754
12nJF
 2 25,5% 145 1.060E-07
9 phalp2_6904
2vDzl
 4 24,8% 145 7.120E-05

Domains

Domains
GH24
Representative sequence (used for alignment): pkYK (133 AA)
Member sequence: 3Dali (175 AA)
1 133 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (pkYK) rather than this protein.
PDB ID
pkYK
Method AlphaFoldv2
Resolution 93.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50