Protein

Protein accession
325tC [EnVhog]
Representative
5knce
Source
EnVhog (cluster: phalp2_20738)
Protein name
325tC
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VKTIPGIPYAAPPRTAAVGSALAQPPKLVVVHCTSNTATAAAEARYAATRTDASSHWTSCHVYVDEHGALGSLSLDRAAWAAYGWANARGWHVELCGLENRVPEATQRIGAAIVRQLCQLGAIPMVHLDGAAVRALHDGRRSTGGVTGHADITAADFDGNDHSDPGDRFDWPRFMGWVNDGEGDDMSGYGYPDPGMPIAEAYRMDALMAGADTVRGGPYAGEPMWLVTAIKQLQAQAAADAARDAAAKAAIDALAAAITAGGGSVDSAAIIARINAVAAAESQAVAALQAELADLRADLAAAHRAAAHAIDSATPEG
Physico‐chemical
properties
protein length:317 AA
molecular weight:32574,0 Da
isoelectric point:5,18
hydropathy:-0,03
Representative Protein Details
Accession
5knce
Protein name
5knce
Sequence length
264 AA
Molecular weight
26764,64520 Da
Isoelectric point
5,42116
Sequence
VVIHDTGNTATAKAEANFAATRTDPQSLWTSCHAYVDTSGPLGSLSLNRQAWAAFSYANQHGLHIEMCGMNTGAPGAVPAATIAHTAALTAVLCDLAGIPKVHRSPAQVAAGASGICGHYDITRGLGVGDHDDPGPNFDWGRFVALVQAGGDNMIDYTQGAPAGALTGNPSRNVGQLLADVWSQTFDARGKIVGDLKPELDEIKALLATLAGKDAVVLTNAQVASIATTIADALVASGANGLSATDHAGVVADVKAALNTLHAG
Other Proteins in cluster: phalp2_20738
Total (incl. this protein): 6 Avg length: 280,7 Avg pI: 5,33
Protein ID Length (AA) pI
5knce 264 5,42116
1fBuT 291 5,47186
5kgc8 278 5,75776
6F1It 267 5,03084
6JbnP 267 5,11553
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21936
4OI93
 1 30,3% 211 1.130E-23
2 phalp2_18569
7cxQw
 45 32,9% 188 5.223E-23
3 phalp2_37855
4LYs8
 19 32,4% 216 3.162E-20
4 phalp2_13713
6Ajj7
 6 29,1% 185 7.426E-18
5 phalp2_17457
7PxDe
 7 30,0% 183 2.015E-13
6 phalp2_16608
eqCG
 19 26,2% 206 1.285E-11
7 phalp2_23494
6SMRG
 1 23,3% 218 1.534E-05
8 phalp2_13982
kgnW
 11 20,9% 191 2.044E-05

Domains

Domains
Ami2
Unannotated
Representative sequence (used for alignment): 5knce (264 AA)
Member sequence: 325tC (317 AA)
1 264 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
325tC
Method AlphaFoldv2
Resolution 83.33
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5knce) rather than this protein.
PDB ID
5knce
Method AlphaFoldv2
Resolution 77.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50