Protein

Protein accession
1Jgdv [EnVhog]
Representative
1Jgdv (this protein)
Source
EnVhog (cluster: phalp2_16855)
Protein name
1Jgdv
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNYEKAWREYFVSVAKSYLGYNEADGSHKNIIDIYNSAKPLPQSYKVTYTDSWCATYVSAMAIKAGLADTIIPRECGCGRYITLCQNMGIWHENENYTPTTGDIILYDWQDGSNYASTDNTNSPDHIGIVTDATGNTITVIEGNKNDSVSYRTIAVNGRYIRGYAIPKYDSLTTPPPGYEEMGETPAVKAPAQTANVELKGVDVSTWNGNINWQKVKAAGIDFAIIRAGYGKNNIDSWFKTNAKNAVAAGVDVGFYWFSYAVNATEAKAEADYLCDAVESLGIKPTYPLCYDYEYDSVDKAKAKGYNPTNAEITAMAEAFLSEIVARGYKAANYTNIDFLNKGFSALTSTYDTWLAQWSVSKPTKDCTLWQYSDQGKVDGISGVVDVNISFKDYADSVTTKPATTATTSAAATYTTLEYGSTGSTVKELQTKLNALGYNCGTVDGNFGAKTMAAVKAFQKANNLTVDGIVGSQTLGAINGGSTVASTTVSNATSHATVRYGSTGADVAALQTILNSNGYNCGKVDGDFGVKTLGAVKKYQKAKGLTVDGIVGPQTWSALGVY
Physico‐chemical
properties
protein length:562 AA
molecular weight:60422,5 Da
isoelectric point:5,27
hydropathy:-0,28
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3439
3WDPn
 5 46,8% 401 2.188E-95
2 phalp2_31158
4080K
 37 39,1% 393 6.535E-71
3 phalp2_20244
8fkhf
 8 37,3% 396 1.795E-55
4 phalp2_10747
3nEcV
 19 36,9% 384 3.087E-46
5 phalp2_14288
3xQM7
 130 35,2% 392 5.595E-46
6 phalp2_32938
3TLgl
 6 27,6% 460 4.190E-31
7 phalp2_1872
3VMqM
 12 29,8% 519 3.134E-30
8 phalp2_14812
7co7l
 1 32,0% 387 3.107E-29
9 phalp2_9937
2Vi2k
 2 31,2% 416 3.064E-28
10 phalp2_36036
5N9T1
 7 28,2% 481 3.996E-27

Domains

Domains
CHAP
GH25
PG_1
PG_1
Protein sequence: 1Jgdv
1 562
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01471, PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1Jgdv
Method AlphaFoldv2
Resolution 85.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50