Protein

Protein accession
2rGDm [EnVhog]
Representative
5y5Uw
Source
EnVhog (cluster: phalp2_6141)
Protein name
2rGDm
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MKLNPRFTLQEYVPKSVFEEHGDKAVRFISTALIKADYQLLKDLEAHYGREITCSINTWSFGGNRNYSGLRVPGEPYYRELSLHSSGSASDKIFTFKDTGARVDNKKIYEFIIANEVKYYELGIRRMEDIRDASTWIHWDTCWTPNKYTKMIKIVRA
Physico‐chemical
properties
protein length:157 AA
molecular weight:18372,7 Da
isoelectric point:8,98
hydropathy:-0,55
Representative Protein Details
Accession
5y5Uw
Protein name
5y5Uw
Sequence length
158 AA
Molecular weight
17917,14750 Da
Isoelectric point
8,45588
Sequence
MRLNHRFNLQEYVSKSAYLKYGDQSSRFICPTLLEVDLLLCKLVEAELGHAVSCTINNWSTGGDRVASGLRMVGEPHYSITSSHAWGRGSDKQFSHKETKARIANNIIYNVVLNNQGALYLAGMRRIEHIDDAPTWLHSDTLWTPDEFVNKIQVVRAK
Other Proteins in cluster: phalp2_6141
Total (incl. this protein): 17 Avg length: 158,8 Avg pI: 7,19
Protein ID Length (AA) pI
5y5Uw 158 8,45588
18XMV 180 7,05278
2Mlna 157 5,95357
2TaDh 160 8,51629
35tLR 157 7,85220
4WjOF 157 8,43796
4shIr 157 8,96796
7H0od 157 5,77827
8COIp 157 5,77833
8FJ2a 157 5,52017
8eGVx 155 7,00850
8jN5S 158 6,30961
8kIX7 157 5,13832
8yQ18 157 5,77833
9zOB 161 7,68892
Hen 157 8,95300
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15854
4n48g
 114 34,8% 149 3.838E-22
2 phalp2_10855
4iQ7K
 18 28,0% 139 2.263E-20
3 phalp2_1968
4BR1x
 969 29,8% 134 1.085E-19
4 phalp2_14890
flzs
 1 27,9% 129 7.753E-17
5 phalp2_1804
38zLG
 170 27,9% 143 2.706E-16
6 phalp2_34764
3iKHD
 290 27,4% 142 2.136E-14
7 phalp2_37920
4UNwK
 25 26,9% 163 3.984E-14
8 phalp2_31809
4kTVa
 1 25,3% 142 8.956E-13
9 phalp2_26244
A6lD
 2 21,1% 151 7.881E-12
10 phalp2_7525
4Yxu6
 7 22,9% 157 3.717E-11

Domains

Domains
Unannotated
Representative sequence (used for alignment): 5y5Uw (158 AA)
Member sequence: 2rGDm (157 AA)
1 158 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5y5Uw) rather than this protein.
PDB ID
5y5Uw
Method AlphaFoldv2
Resolution 96.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50