Protein

Protein accession
2rDl5 [EnVhog]
Representative
1ieds
Source
EnVhog (cluster: phalp2_4067)
Protein name
2rDl5
Lysin probability
98%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MNNKMTWIRIPFWKEFLAKNWFKLVLIGFLLFVATKQNVSATFSWSTTPELAAHNIEAIPQPDSISPITVVHAGLVTTKQPAKNEYAPISTEELNTMDDKTAAYINRFSHIAVSEMHKYGIPASIKLAQGLIESRAGTSRLAVNNNNHFGIKCHSKKCKKGHCINATDDHHKDFFRIYDSPWESWRAHSILITKGRYVNLTGYGVDYKKWAHGLKKAGYATDKHYAGKLIRVIEEYKLYEYDK
Physico‐chemical
properties
protein length:243 AA
molecular weight:27762,5 Da
isoelectric point:9,43
hydropathy:-0,40
Representative Protein Details
Accession
1ieds
Protein name
1ieds
Sequence length
224 AA
Molecular weight
25267,83130 Da
Isoelectric point
9,55758
Sequence
MGIFILFGIGFTLQSYKDATLSYQASMANMEVPRIIDRPPLPEEKKEVTLPYPEKKNEKKKEEIPDESAAPRPVSSLKEDQATAYIDRFKKIAVLEMKKYGIPASISLAQGLIESGAGTSRLAVKANNHFGIKCFSKRCKAGHCINASDDSHKDYFKKFGNAWESWRAHSLMLAGGRYSKLKKYGKDYRKWAVGLRTAGYATDKAYASKLIGVIEKYDLHRFDR
Other Proteins in cluster: phalp2_4067
Total (incl. this protein): 18 Avg length: 237,0 Avg pI: 9,21
Protein ID Length (AA) pI
1ieds 224 9,55758
1P0ht 264 9,13396
1Qvn3 193 9,51284
1kKMU 245 9,39654
1sNKQ 251 9,41743
25nKs 225 8,89472
2InVL 241 8,10904
2MqNW 179 9,36057
2R1Nk 179 9,44322
5cEOz 241 8,82245
5ijD2 258 9,62128
6R9Rz 238 8,71298
7ZYVt 301 9,36701
8at1a 193 8,18260
8flcb 275 9,63017
QiO4 233 9,75705
Qiib 283 9,40105
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9653
1OZ1H
 16 56,5% 145 2.955E-55
2 phalp2_20354
2PRXw
 122 49,6% 153 1.755E-53
3 phalp2_564
Jnmz
 8 55,3% 141 8.437E-53
4 phalp2_17482
5fsmJ
 7 41,7% 175 1.711E-41
5 phalp2_28258
Ddao
 2 38,3% 159 6.900E-34
6 phalp2_29619
83Xjg
 46 39,4% 147 6.900E-34
7 phalp2_31185
7Uzlm
 1 43,2% 141 3.533E-31
8 phalp2_17096
2pvAk
 2 34,6% 147 3.128E-30
9 phalp2_7395
4DNgX
 1 30,3% 211 2.765E-29
10 phalp2_28108
7xE0g
 17 35,8% 145 9.601E-29

Domains

Domains
Disordered region
GLUCO
Representative sequence (used for alignment): 1ieds (224 AA)
Member sequence: 2rDl5 (243 AA)
1 224 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2rDl5
Method AlphaFoldv2
Resolution 80.66
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1ieds) rather than this protein.
PDB ID
1ieds
Method AlphaFoldv2
Resolution 79.79
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50