Protein

Protein accession
2qXM8 [EnVhog]
Representative
1gyND
Source
EnVhog (cluster: phalp2_30977)
Protein name
2qXM8
Lysin probability
94%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MEYAIYPFDEMKITQRHDEGNHKPHWYGSTNYSDKPWDEACKDSGRSYFVPGNDYVIEQILGAGTSITNTVRLKSVNKLKTPYKEDLDYLFITLTHMEEEDLHEVYVGQVIHKGEKILREGMDGQATGNHFHCTANFGKYYGLLENSNGKWCYTYEKSLLPDEAFYIDKNKTTIYNANGYNFKEVAPQPTPPTPSDYPWDGVVKKGSPLYRENGSKYPNGASCDRDVSVEGELNGRYKVWGETFNPHEVYVDKNNVVRKGSIYPFNATVKKGSPLYDANGNKYPNGASANRPVIVQGELNGRYQIYGETFTPHVVYCDKSSIIR
Physico‐chemical
properties
protein length:324 AA
molecular weight:36892,6 Da
isoelectric point:6,08
hydropathy:-0,80
Representative Protein Details
Accession
1gyND
Protein name
1gyND
Sequence length
255 AA
Molecular weight
29453,58960 Da
Isoelectric point
7,85065
Sequence
LKIRKEVNNMEYAIYPFEYMRITQRHDEGNHLAHWSPFKDYSDKPFDEATQDGGRGYFVPKNKYKVVEKTGSQNNGYNVRLETVNKVKIPYQDDPVILEVTLTHINYDDWSKLYNGQIINVGEKIIREGTSGQASGNHLHCTANFGKYYGFKKNSNGKWVFAYDKALTPEEAFYVDSTVQILNNKGYNFKEVPKRYYTKGDSGKDIENVNNYLSNKVKGDYFGDYTEATLNVFKRKNNLPEDGIIDETVLKLMGL
Other Proteins in cluster: phalp2_30977
Total (incl. this protein): 11 Avg length: 279,8 Avg pI: 7,02
Protein ID Length (AA) pI
1gyND 255 7,85065
1FPTV 251 7,73831
3dRYi 256 5,77094
3fPWN 293 5,88985
3ilC6 297 6,11135
3kuLA 330 8,91251
4kdjd 306 4,58511
5EJI 249 8,57753
67Ur5 249 6,31034
6u87U 268 9,35644
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36734
6wFxi
 48 38,7% 186 1.723E-59
2 phalp2_35713
3TDiN
 29 40,1% 187 5.986E-56
3 phalp2_10424
21qZ3
 9 30,8% 172 2.126E-29
4 phalp2_25173
1Q6iX
 8 29,2% 205 1.412E-24
5 phalp2_39979
1KNyb
 59 30,6% 183 3.046E-23
6 phalp2_11194
66qoq
 192 28,1% 185 1.412E-15
7 phalp2_2324
4L5iV
 1 27,0% 185 3.900E-10
8 phalp2_10426
21zbN
 33 23,2% 215 1.700E-09
9 phalp2_21449
81MyM
 1 23,0% 182 7.652E-08

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 1gyND (255 AA)
Member sequence: 2qXM8 (324 AA)
1 255 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2qXM8
Method AlphaFoldv2
Resolution 88.35
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1gyND) rather than this protein.
PDB ID
1gyND
Method AlphaFoldv2
Resolution 90.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50