Protein

Protein accession
2k9EM [EnVhog]
Representative
syBX
Source
EnVhog (cluster: phalp2_10178)
Protein name
2k9EM
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSWFPWSSKKRVSSLDALDNEFRPLIEGVLSDIKSRGLKFKVFETYRTPARQKMLLATGKSRKKVSNHCKGLACDIVHLRNGRWDWSDFNDYLPLGEIIKKHPKLRWGGSWRYFKDGAHIELR
Physico‐chemical
properties
protein length:123 AA
molecular weight:14449,6 Da
isoelectric point:10,06
hydropathy:-0,65
Representative Protein Details
Accession
syBX
Protein name
syBX
Sequence length
156 AA
Molecular weight
18117,66830 Da
Isoelectric point
8,59152
Sequence
MVKMIKSENLLYPRFLEKLKDVQKEFNEQTGHRILIHETYRLPERQQWLYELGRTRKGRVVTNTLASTHFLGLSCDFVGDISPAPGIQGPYDIDWNKLGAIVLSKGLVWGGNFKSRDMVYVEMRGPYTVKDLFEMVEQHGILYLWNKLEGYYGQGT
Other Proteins in cluster: phalp2_10178
Total (incl. this protein): 6 Avg length: 150,3 Avg pI: 7,69
Protein ID Length (AA) pI
syBX 156 8,59152
3X18c 156 7,93504
4iWPn 154 6,29449
8skQ 157 6,22713
P02E 156 7,02515
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27726
6US3d
 23 37,4% 147 4.866E-25
2 phalp2_34371
4aKCB
 348 38,4% 125 1.890E-19
3 phalp2_1337
15l6q
 1516 35,2% 139 4.726E-16
4 phalp2_30036
2A7eb
 4 34,2% 143 4.726E-16
5 phalp2_20150
3NHfJ
 54 34,1% 117 4.207E-15
6 phalp2_13115
8rf6U
 1025 29,1% 144 9.518E-14
7 phalp2_33807
1hNOs
 60 34,0% 144 4.517E-13
8 phalp2_31193
80LXU
 366 33,3% 108 6.167E-13
9 phalp2_35414
f7cN
 32 33,6% 122 2.141E-12
10 phalp2_10312
1lxqG
 1 26,0% 173 2.141E-12

Domains

Domains
Unannotated
Representative sequence (used for alignment): syBX (156 AA)
Member sequence: 2k9EM (123 AA)
1 156 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (syBX) rather than this protein.
PDB ID
syBX
Method AlphaFoldv2
Resolution 91.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50