Protein

Protein accession
4RodC [EnVhog]
Representative
4RodC (this protein)
Source
EnVhog (cluster: phalp2_40570)
Protein name
4RodC
Lysin probability
97%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MPEVPYSPVPSVLPSTSVPSDYLNVQANPADFGAQVGQATERLGATLGQASDRLADAVLQRQRVINNIGSDQAYYRFQDFGTKQLFGDPNNPSTPGYLGLHGQAAVDGGQGVISAIQAQREAIKQSLANPMQQLAFDESSRRLENYMLERVGAHYQTQSFRYGLDTQNAAIEVKARDVAANYNDPEHFQHNLEDAMLAADKINTLNSASPEEAANTRFQVAQKLFTSRAEGIGNANPAAAEQFVKDNITRFDAATASSLLGKYRAGADRASVADGINHVMSGGAGGGGYVPAAGAGAGAGAPPVISQAINVTEGLGPDGQARDGIIPGTFNLYKRGAESFDNPADRAAVKERVIADLWQKAHGDPERVAVGMISGPGNIAPPGSPTPWKENRSDGRVTVAQYVDKFNEHLAALGGAGAGSPVQPAAATTTAPGPAGSTSPPVQSSHNPEVFGAEFARMEAARAEARQRFPDRPDLQHAMIEGVWQEIAQANTLQAKYEADVAKQKRDAQEAAGSRVVNQLLTDPTKFDPNELAANTDLTWEQKDHLWRVAQDHLNQVTGGREAREYGPGFWSAYQAVHASDPDKRITDPAQLWARGGPNGDLTLAGIHELTTEIMGTRTPEGQAEGQMKRAFFDAAHARISQHGLLGGKDPIGEQRFAQFMVSGLTLYENLRQAGKSPQDILGKDGPLEKLSSQYVRTQKQQWEDFQAANNPIQDDGGGTPAPAAAGTRDLTTAAGIKAAYKDGYWGYGPAAWDRAEAELRRRGLMVAPGQSGPSAPTTP
Physico‐chemical
properties
protein length:780 AA
molecular weight:83081,8 Da
isoelectric point:5,41
hydropathy:-0,55
Other Proteins in cluster: phalp2_40570
Total (incl. this protein): 3 Avg length: 778,3 Avg pI: 5,20
Protein ID Length (AA) pI
4JvQW 793 5,08848
4qAaF 762 5,11189
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11309
6XHkz
 6 30,5% 746 1.189E-85
2 phalp2_293
6JgmF
 13 29,5% 766 1.184E-69
3 phalp2_29079
6TsHS
 3 27,5% 609 1.052E-61
4 phalp2_3882
6QEh8
 2 27,8% 528 8.848E-59
5 phalp2_18987
86KhQ
 23 25,3% 814 4.246E-48
6 phalp2_19739
4RnFA
 14 24,9% 814 9.234E-44
7 phalp2_14506
4Rn2g
 4 23,4% 739 8.953E-43
8 phalp2_22924
350Ax
 3 23,4% 760 6.886E-37
9 phalp2_32936
3Tbkq
 3 22,4% 1001 1.426E-34
10 phalp2_31754
45EtN
 3 24,9% 910 1.887E-34

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4RodC
Method AlphaFoldv2
Resolution 76.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50