Protein

Protein accession
4RkER [EnVhog]
Representative
4RkER (this protein)
Source
EnVhog (cluster: phalp2_35888)
Protein name
4RkER
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKLVIDISHWQNLTDANYVELKAHGVSGVIAKLGQGRYEDNMAETHARMAAKHNLPFAGYFWHDPIDQIQPQLDNANRLINKYDPAFLAVDTEQWWLSWSEWYNYYVRRNGIRPRVMSPDKIYEQAYGFTTQLHTAMSRVLPIGAYTGDWFIKSYCRRLPSLIKMVDFYWRAWYPDIDANDNRVIEWVELLKPRPFQVEPGAPHYEIWQFAVADLPGALPRLDYNWCTEGFYANTFAKQLAEEEAENEDDEVQSPSEPVWQVLVDALNVRAHPNKRAPKAGLYKRGALVEGTEVPTEEGRWIKVGEEGYMCIELNGKIFLKEVDSGE
Physico‐chemical
properties
protein length:327 AA
molecular weight:37909,3 Da
isoelectric point:5,16
hydropathy:-0,50
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6394
5NLU
 30 33,0% 233 8.478E-23
2 phalp2_12505
UE7O
 1 26,4% 242 3.562E-09
3 phalp2_4672
4FqbY
 4 23,6% 279 7.962E-07
4 phalp2_6995
3bGdW
 5 24,2% 239 1.057E-06
5 phalp2_9921
2NATP
 5 25,5% 325 7.680E-06
6 phalp2_5144
1Zty9
 17 24,7% 291 5.307E-04

Domains

Domains
GH25
Unannotated
Protein sequence: 4RkER
1 327
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4RkER
Method AlphaFoldv2
Resolution 91.53
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50