Protein

Protein accession
1IKpd [EnVhog]
Representative
1IKpd (this protein)
Source
EnVhog (cluster: phalp2_3018)
Protein name
1IKpd
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTVIFVPRAQAGLREPKTLVPINKPVEIIAIHHSAAPVDVNPMKTWSQIQGLHMLTNGWADIAYTLGAGVDRRDGAKQPVIMEGRITNGKAAVGAHTLGYNDKAVAICVPGNFQNDGVDNELIEAILGAIQWSKDHNMCTQNPVIESHSKFVRTACAGANMIVRIPEIREASSGGSAPSTPLPATPVTPANVPYPGFPLPSGHWFGVANSNVRNHSGFWAEDRPKIWQFKSQLERRGWKIAVTDRFDEATKQIVIAFQKEKGLKPDGLVGTITHRTFWEAPIT
Physico‐chemical
properties
protein length:283 AA
molecular weight:30862,9 Da
isoelectric point:8,97
hydropathy:-0,22
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20947
7lyTA
 33 29,9% 301 7.256E-24
2 phalp2_36432
11r0n
 207 28,6% 290 5.379E-19
3 phalp2_398
7qxjv
 88 28,7% 202 4.165E-10
4 phalp2_13210
2JwXt
 44 25,0% 276 5.692E-09
5 phalp2_16116
4fS9V
 1 28,6% 206 4.310E-08
6 phalp2_36521
1qwup
 277 23,8% 264 7.586E-06
7 phalp2_5539
3EPBj
 12 28,8% 260 1.788E-05

Domains

Domains
Unannotated
PG_1
Protein sequence: 1IKpd
1 283
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1IKpd
Method AlphaFoldv2
Resolution 92.12
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50