Protein

Protein accession
2cypD [EnVhog]
Representative
4LX0x
Source
EnVhog (cluster: phalp2_6002)
Protein name
2cypD
Lysin probability
99%
PhaLP type
endolysin
Probability: 93% (predicted by ML model)
Protein sequence
MKLIIFIILLLFPLLAHAKDFNEYQIKLLTIAYTYGMEIGWPETVQAILLNESLTTIPKISYVVGDIKNGFGRRSYGRMQIQLLTAQFVITRYGLVEYPTEETLITRLITDDDFNIYIGSIYFNYLYKRFRDWEAAVVAYNKGPGWVKNSREKVSKNLYLKNIRQLIINKVRPFNKKADK
Physico‐chemical
properties
protein length:180 AA
molecular weight:21087,5 Da
isoelectric point:9,60
hydropathy:-0,05
Representative Protein Details
Accession
4LX0x
Protein name
4LX0x
Sequence length
164 AA
Molecular weight
18789,88520 Da
Isoelectric point
9,81352
Sequence
MKKKIVIIFCILSFIPSICFAFTDQQNYLLSIAGKYGAMFGYPKTVKGVLMQETLAGKLGRIGDDGRSFGVMQVQLATAKFMIKKKLFNFYGTDKQLAQALRYDDDFNIMVGSRYIKYLIGYYHGDIKKAVLAYNVGPGNVNKHGLKFDPNHYRRRVFYYANKF
Other Proteins in cluster: phalp2_6002
Total (incl. this protein): 4 Avg length: 184,0 Avg pI: 9,06
Protein ID Length (AA) pI
4LX0x 164 9,81352
19sEB 202 10,22412
4LXaI 190 6,59698
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13906
8djT
 11 34,4% 125 4.233E-13
2 phalp2_37089
16u4b
 9 26,8% 145 1.315E-09
3 phalp2_1437
1BM9o
 11 30,5% 134 3.861E-08
4 phalp2_4421
2GvBa
 2 22,7% 154 6.053E-07

Domains

Domains
Disordered region
SLT
Representative sequence (used for alignment): 4LX0x (164 AA)
Member sequence: 2cypD (180 AA)
1 164 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2cypD
Method AlphaFoldv2
Resolution 85.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4LX0x) rather than this protein.
PDB ID
4LX0x
Method AlphaFoldv2
Resolution 89.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50