Protein

Protein accession
2b0PD [EnVhog]
Representative
4RiPp
Source
EnVhog (cluster: phalp2_24517)
Protein name
2b0PD
Lysin probability
87%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPSGIDVPKRETDFLYPKPTTAQRLTAFLAAVVAYQEGIDESRYQYSATRRVNHAAAFHGGVAFTVIRVSNCLNADTYFEQAWTDAMSAGMPIMLYANVQGYRSGREQAEFAMRTAEPFIKACRTKVVIWGDFEADGLTMSVANRQKLALEFLNSIHAAGYETGIYSNLKYWIEMYGNLKPPAWAWLWGAHWTSAASGKFPSSWDLSRLAIWQYGIWDKHAWAKSVPGNQPDIDKDRWMWQGGDVVTFLQKVQEPQPLPLEARVKALEEIIGWHTSDISDLQKMLDGVREELFDANNRLMALEARVVEVKKDG
Physico‐chemical
properties
protein length:313 AA
molecular weight:35436,8 Da
isoelectric point:5,92
hydropathy:-0,30
Representative Protein Details
Accession
4RiPp
Protein name
4RiPp
Sequence length
392 AA
Molecular weight
43942,48550 Da
Isoelectric point
5,87177
Sequence
MTEPIRNPAAFTYPEPSFISKLFAKVGIQAAEAVYKQLIDESHWQYENGKEVDHAAAREGGFPGTIIRATIGMEVDTAWKAGNWKRALDDGMMVQTYHFHIGNMSGSNQADFHLNATKEFADEVEKYGAIVVSYGDYEADGTTTPVTTRKQNMLAFQTYLHNNNRENGIYSSVKYYLELLGNIAPPPWCWLWGAHWTAGTPVFPSVWNKAKIVAWQYAVWDNFSFAKPVPGNVPDIDVNKWIYALTMKDFLNWGTTSPPPVDCCDKLDAKINDLASSVGNQFAEINRVLSELKSAIGLHVPVTTVNVSKDSVLRWDRTYNGVYKPKYDFYPTGSVDDVGKRIHVIGKLMIFPIPLIGDGGQVCYMVVEPKYYIGIPAGITLFIRKEDIVFPT
Other Proteins in cluster: phalp2_24517
Total (incl. this protein): 2 Avg length: 352,5 Avg pI: 5,90
Protein ID Length (AA) pI
4RiPp 392 5,87177
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11989
36rC5
 6 30,4% 309 3.191E-36
2 phalp2_8715
8a2ww
 4 22,1% 428 9.988E-05
3 phalp2_6607
1p0KW
 6 22,0% 254 1.322E-04

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 4RiPp (392 AA)
Member sequence: 2b0PD (313 AA)
1 392 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4RiPp) rather than this protein.
PDB ID
4RiPp
Method AlphaFoldv2
Resolution 67.44
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50