Protein

Protein accession
2YkKR [EnVhog]
Representative
5EJWp
Source
EnVhog (cluster: phalp2_7597)
Protein name
2YkKR
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTTFKDYAISSGHGKYVRGAKGYIDEVDEARKVVSKVVDLLQERGCKVKEIHDNTSKTQAQNVIGKNSYLVRTHNAQNRQIDISVHFNANRTTSSPMGTEVYYYSNDMKKVASDLSSAIAKAGGFKNRGGKCEKDLSFLANTAKPAILIEVCFVDSKADADLYKKNFDKICEAIAKTLSGKSAPKKETPKPATPAKSGSYKVGSFQKQVQITTELNVRSGRGSEFKVLGAFKKNAKTSVWYIDKSKDGALWGSVTFNGKTGYVNMAYTKQV
Physico‐chemical
properties
protein length:271 AA
molecular weight:29743,5 Da
isoelectric point:9,65
hydropathy:-0,56
Representative Protein Details
Accession
5EJWp
Protein name
5EJWp
Sequence length
343 AA
Molecular weight
36829,92300 Da
Isoelectric point
4,97900
Sequence
MTAFAISSGHGKKIRGASGYLDEVDEARRVVARVAEILNAFSVGVKTFNDDVSTSQNENLNRIVDWHNAQKRDLDVSVHFNAYQTTSKPMGTECLYVTQQTLASEVAKAIADAGGLINRGPKKRTDLFFLNKTSKPSILVEVCFVDSSADEDLYEDNFEAICGAIASAISGQNVEPVPPSTEPPAETEEPLEPEQHPTVKKGSKGPPVVEVQTALYIMPVDGDFGSITDSAVKNFQRTSGLTADGIVGPQTWAAIDALVPGEPLPLPPGALPPLTAEDQAGVIGIVTASKIYRYNWKDRGIMPPGYSKGLALTWANTVRKFHAGDSAVKEMAKADTRNDDKDA
Other Proteins in cluster: phalp2_7597
Total (incl. this protein): 11 Avg length: 337,4 Avg pI: 6,69
Protein ID Length (AA) pI
5EJWp 343 4,97900
118wM 257 8,71704
1341z 422 6,36781
4EI3w 469 4,71215
4F2y3 471 4,49951
7J6Ti 254 6,66036
7J6WA 254 7,07136
7J76H 253 6,65951
9vIe 411 5,86302
jDVG 306 8,42268
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_18473
6I4ij
 130 65,3% 346 1.830E-137
2 phalp2_10532
82sT5
 257 34,7% 273 9.486E-43
3 phalp2_20454
3yEy4
 9 31,7% 227 2.396E-20
4 phalp2_26225
oqMn
 4 24,6% 341 5.270E-16
5 phalp2_17753
7uM5Y
 14 27,1% 269 3.028E-15

Domains

Domains
Ami3
PG_1
Unannotated
Representative sequence (used for alignment): 5EJWp (343 AA)
Member sequence: 2YkKR (271 AA)
1 343 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2YkKR
Method AlphaFoldv2
Resolution 93.56
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5EJWp) rather than this protein.
PDB ID
5EJWp
Method AlphaFoldv2
Resolution 89.16
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50